SMTL ID : 3msk.1

Fragment Based Discovery and Optimisation of BACE-1 Inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 4 residues within 4Å: Chain A: H.61, T.119, E.120, S.121 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: R.70, Q.71, Y.76 No protein-ligand interaction detected (PLIP)

1 x EV4: 4-(2-amino-5-chloro-1H-benzimidazol-1-yl)-N-cyclohexyl-N-methylbutanamide(Non-covalent)

EV4.3: 11 residues within 4Å: Chain A: L.46, D.48, G.50, S.51, V.85, Y.87, W.92, F.124, D.244, G.246, T.247 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.46, A:Y.87, A:F.124 Salt bridges: A:D.48, A:D.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Madden, J. et al., Fragment-based discovery and optimization of BACE1 inhibitors. Bioorg.Med.Chem.Lett. (2010)

Release Date

2010-07-14

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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