SMTL ID : 3n2a.1

Crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase from Yersinia pestis CO92

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 18 residues within 4Å: Chain A: T.60, N.61, G.62, K.63, G.64, T.65, E.149, P.269, A.271, N.272, R.304, D.317, V.318, A.319, H.323, A.324, Y.327 Ligands: MG.2 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:N.61, A:G.62, A:K.63, A:G.64, A:T.65, A:N.272, A:N.272, A:G.303, A:D.317, A:V.318 Water bridges: A:T.60, A:K.63, A:K.63, A:K.63, A:R.304, A:R.304, A:R.304, A:N.321 Salt bridges: A:K.63, A:R.304

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: S.86, E.149 Ligands: ADP.1 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.86, A:E.149, H2O.7, H2O.8, H2O.8

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: S.86, F.127, G.151, L.152 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.86 Water bridges: A:R.95 EDO.4: 6 residues within 4Å: Chain A: T.60, A.173, D.175, Y.182, I.187, K.191 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.60, A:Y.182, A:K.191

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 6 residues within 4Å: Chain A: C.68, E.71, R.97, G.100, S.300, L.301 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase from Yersinia pestis CO92. TO BE PUBLISHED

Release Date

2010-06-30

Peptides

Bifunctional folylpolyglutamate synthase/dihydrofolate synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bifunctional folylpolyglutamate synthase/dihydrofolate synthase

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