SMTL ID : 3nrs.1

Crystal structure of ligand-free bifunctional folylpolyglutamate synthase/dihydrofolate synthase from yersinia pestis c092

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

3 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 11 residues within 4Å: Chain A: G.59, T.60, L.152, G.153, A.173, L.174, D.175, H.176, Y.182, I.187, K.191 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.153, A:A.173, A:D.175, A:D.175, A:Y.182, A:K.191 Water bridges: A:T.60, A:K.63 Salt bridges: A:H.176, A:K.191 TLA.2: 10 residues within 4Å: Chain A: T.60, N.61, G.62, K.63, G.64, S.86, P.87, E.149, H.320, F.425 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:G.62, A:K.63, A:K.63, A:G.64, A:S.86 Water bridges: A:E.149, A:R.304, A:R.304, A:H.320 Salt bridges: A:K.63, A:K.63, A:H.320 TLA.3: 5 residues within 4Å: Chain A: R.80, I.98, Q.99, L.103, A.141 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.80, A:R.80

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 6 residues within 4Å: Chain A: N.61, G.62, P.269, N.272, H.323, A.324 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.272 Water bridges: A:G.62, A:G.62, A:T.65, A:S.171, A:S.171, A:A.324, A:Y.327 GOL.5: 3 residues within 4Å: Chain A: P.322, H.323, R.326 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.326, A:R.326 Water bridges: A:C.365 GOL.7: 2 residues within 4Å: Chain A: W.179, Y.182 No protein-ligand interaction detected (PLIP)

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.6: 7 residues within 4Å: Chain A: P.87, H.320, L.354, K.357, S.424, F.425, H.426 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.424, A:F.425 Water bridges: A:R.95, A:R.95 Salt bridges: A:H.320, A:K.357

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Crystal structure of ligand-free bifunctional folylpolyglutamate synthase/dihydrofolate synthase from yersinia pestis c092. TO BE PUBLISHED

Release Date

2010-08-04

Peptides

Dihydrofolate:folylpolyglutamate synthetase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dihydrofolate:folylpolyglutamate synthetase

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