- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.36 Å
- Oligo State
- hetero-oligomer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x PEO: HYDROGEN PEROXIDE(Non-functional Binders)
PEO.3: 6 residues within 4Å:- Chain A: S.159, A.193, K.260, N.264
- Chain B: N.103, N.105
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:K.260, A:K.260, B:N.103, B:N.105
- Water bridges: A:S.159, A:Y.163, A:N.264
PEO.7: 6 residues within 4Å:- Chain C: S.159, A.193, K.260, N.264
- Chain D: N.103, N.105
9 PLIP interactions:7 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:K.260, C:K.260, C:N.264, D:N.103, D:N.105
- Water bridges: C:Y.163, C:Y.163, C:N.264, C:N.264
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
FMN.4: 22 residues within 4Å:- Chain A: E.21, R.25, Y.197
- Chain B: S.28, S.29, S.31, E.32, N.33, T.34, P.67, S.68, Y.69, G.70, G.71, S.101, G.102, N.103, F.106, A.109, Y.110, G.111, L.131
23 PLIP interactions:20 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:Y.69, B:Y.69, A:R.25, A:Y.197
- Hydrogen bonds: B:S.29, B:N.33, B:N.33, B:T.34, B:T.34, B:S.68, B:S.68, B:Y.69, B:G.70, B:S.101, B:N.103, B:A.109, B:G.111, B:L.131, A:R.25
- Water bridges: B:N.33, B:S.101
- pi-Stacking: B:F.106, B:F.106
FMN.8: 20 residues within 4Å:- Chain C: R.25, Y.197
- Chain D: S.28, S.29, S.31, E.32, N.33, T.34, P.67, S.68, Y.69, G.70, S.101, G.102, N.103, F.106, A.109, Y.110, G.111, L.131
20 PLIP interactions:17 interactions with chain D, 3 interactions with chain C- Hydrophobic interactions: D:Y.69, C:R.25, C:Y.197
- Hydrogen bonds: D:S.29, D:N.33, D:N.33, D:T.34, D:S.68, D:S.68, D:Y.69, D:Y.69, D:G.70, D:S.101, D:N.103, D:A.109, D:G.111, D:L.131, C:R.25
- pi-Stacking: D:F.106, D:F.106
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Boal, A.K. et al., Structural basis for activation of class Ib ribonucleotide reductase. Science (2010)
- Release Date
- 2010-08-18
- Peptides
- Ribonucleoside-diphosphate reductase 2 subunit beta: AC
Protein nrdI: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
AB
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.36 Å
- Oligo State
- hetero-oligomer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x PEO: HYDROGEN PEROXIDE(Non-functional Binders)
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Boal, A.K. et al., Structural basis for activation of class Ib ribonucleotide reductase. Science (2010)
- Release Date
- 2010-08-18
- Peptides
- Ribonucleoside-diphosphate reductase 2 subunit beta: AC
Protein nrdI: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
AB
CD
D