SMTL ID : 3nax.1

PDK1 in complex with inhibitor MP7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x MP7: 1-(3,4-difluorobenzyl)-2-oxo-N-{(1R)-2-[(2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)oxy]-1-phenylethyl}-1,2-dihydropyridine-3-carboxamide(Non-covalent)

MP7.1: 24 residues within 4Å: Chain A: L.37, G.40, S.43, A.58, K.60, P.74, Y.75, M.83, F.91, V.92, L.108, S.109, Y.110, A.111, L.145, I.150, H.152, L.161, I.170, T.171, D.172, F.173, G.174, A.176 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:K.60, A:P.74, A:Y.75, A:Y.75, A:Y.75, A:F.91, A:L.108, A:L.108, A:T.171, A:D.172, A:F.173, A:F.173, A:A.176 Hydrogen bonds: A:K.60, A:S.109, A:A.111, A:D.172, A:D.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagashima, K. et al., Genetic and pharmacological inhibition of PDK1 in cancer cells: characterization of a selective allosteric kinase inhibitor. J.Biol.Chem. (2011)

Release Date

2010-11-24

Peptides

3-phosphoinositide-dependent protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3-phosphoinositide-dependent protein kinase 1

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