SMTL ID : 3ni6.1

Crystal structure of the FK506 binding domain of Plasmodium vivax FKBP35

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

homo-dimer

Ligands

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: Y.43, D.55, V.73, I.74, W.77, Y.100, F.117 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.55, A:D.55, A:I.74, A:Y.100 GOL.2: 4 residues within 4Å: Chain A: G.36, E.38, H.67, E.126 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.36 GOL.3: 5 residues within 4Å: Chain A: E.102, P.110, G.111, N.112 Chain B: E.103 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:E.103, A:G.111, A:N.112 GOL.4: 2 residues within 4Å: Chain A: Q.70 Chain B: R.60 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Water bridges: B:R.60, B:R.60 Hydrogen bonds: A:Q.70 GOL.5: 1 residues within 4Å: Chain B: K.35 No protein-ligand interaction detected (PLIP) GOL.6: 2 residues within 4Å: Chain B: A.82, S.83 No protein-ligand interaction detected (PLIP) GOL.7: 5 residues within 4Å: Chain B: V.73, I.74, W.77, Y.100, F.117 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.74, B:W.77, B:Y.100 GOL.8: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alag, R. et al., Structural insights into substrate binding by PvFKBP35, a peptidylprolyl cis-trans isomerase from the human malarial parasite Plasmodium vivax. EUKARYOTIC CELL (2013)

Release Date

2011-04-27

Peptides

70 kDa peptidylprolyl isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

70 kDa peptidylprolyl isomerase

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