SMTL ID : 4mgv.1

Crystal structure of FK506 binding domain of plasmodium VIVAX FKBP35 In complex with inhibitor D5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

homo-dimer

Ligands

2 x D5I: N'-(1-adamantylcarbonyl)pyridine-4-carbohydrazide(Non-covalent)

D5I.1: 12 residues within 4Å: Chain A: Y.43, D.55, F.64, V.73, I.74, W.77, Y.100, F.117 Chain B: Y.100, C.105, I.109 Ligands: D5I.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.43, A:Y.43, A:F.64, A:V.73, A:W.77, A:W.77, A:Y.100, A:F.117 Hydrogen bonds: A:I.74 D5I.2: 12 residues within 4Å: Chain A: Y.100, C.105, I.109 Chain B: Y.43, D.55, F.64, V.73, I.74, W.77, Y.100, F.117 Ligands: D5I.1 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:Y.43, B:Y.43, B:F.64, B:V.73, B:W.77, B:W.77, B:Y.100, B:F.117 Hydrogen bonds: B:I.74, B:Y.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harikishore, A. et al., Adamantyl derivative as a potent inhibitor of Plasmodium FK506 binding protein 35. Acs Med.Chem.Lett. (2013)

Release Date

2013-12-04

Peptides

70 kDa peptidylprolyl isomerase, putative: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

70 kDa peptidylprolyl isomerase, putative

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