SMTL ID : 3ny8.1

Crystal structure of the human beta2 adrenergic receptor in complex with the inverse agonist ICI 118,551

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.84 Å

Oligo State

monomer

Ligands

2 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 9 residues within 4Å: Chain A: Y.78, T.81, S.82, C.85, V.89, R.159, I.162, W.166 Ligands: CLR.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.81, A:V.89, A:I.162, A:W.166, A:W.166 CLR.2: 7 residues within 4Å: Chain A: I.63, L.88, V.89, L.92, A.93 Ligands: CLR.1, OLA.4 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.63, A:I.63, A:L.88, A:V.89, A:L.92

1 x JRZ: (2S,3S)-1-[(7-methyl-2,3-dihydro-1H-inden-4-yl)oxy]-3-[(1-methylethyl)amino]butan-2-ol(Non-covalent)

JRZ.3: 13 residues within 4Å: Chain A: D.121, V.122, V.125, T.126, F.201, S.211, S.215, W.422, F.425, F.426, N.429, N.448, Y.452 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:D.121, A:V.122, A:V.125, A:F.201, A:F.201, A:F.426, A:F.426 Hydrogen bonds: A:D.121, A:N.448, A:Y.452

1 x OLA: OLEIC ACID(Non-covalent)

OLA.4: 6 residues within 4Å: Chain A: A.93, F.97, F.109, W.113 Ligands: CLR.2, PGE.7 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.93, A:F.97, A:F.97, A:W.113, A:W.113, A:W.113

2 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.5: 1 residues within 4Å: Chain A: L.103 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.103 OLC.6: 6 residues within 4Å: Chain A: L.53, F.57, L.61, K.68, E.474, L.475 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.53, A:F.57, A:F.57, A:L.61 Hydrogen bonds: A:K.68, A:K.68, A:E.474

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.7: 3 residues within 4Å: Chain A: T.108, F.109 Ligands: OLA.4 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wacker, D. et al., Conserved Binding Mode of Human beta(2) Adrenergic Receptor Inverse Agonists and Antagonist Revealed by X-ray Crystallography. J.Am.Chem.Soc. (2010)

Release Date

2010-08-11

Peptides

Beta-2 adrenergic receptor, Lysozyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Beta-2 adrenergic receptor, Lysozyme

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