SMTL ID : 3ny9.1

Crystal structure of the human beta2 adrenergic receptor in complex with a novel inverse agonist

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.84 Å

Oligo State

monomer

Ligands

2 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 10 residues within 4Å: Chain A: Y.78, T.81, S.82, C.85, V.89, I.120, L.123, R.159, L.163, W.166 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:T.81, A:V.89, A:I.120, A:L.123, A:L.163, A:W.166, A:W.166 CLR.2: 6 residues within 4Å: Chain A: I.63, T.81, C.85, V.89, L.92, A.93 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.63, A:T.81, A:V.89, A:L.92

1 x JSZ: ethyl 4-({(2S)-2-hydroxy-3-[(1-methylethyl)amino]propyl}oxy)-3-methyl-1-benzofuran-2-carboxylate(Non-covalent)

JSZ.3: 20 residues within 4Å: Chain A: W.117, T.118, D.121, V.122, V.125, T.126, F.201, T.203, Y.207, A.208, S.211, S.212, S.215, W.422, F.425, F.426, N.429, Y.444, N.448, Y.452 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.117, A:T.118, A:V.122, A:V.125, A:F.201, A:F.425 Hydrogen bonds: A:D.121, A:N.429, A:N.448, A:Y.452 pi-Stacking: A:F.426

1 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.4: 5 residues within 4Å: Chain A: A.54, F.57, V.60, L.61, L.475 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.54, A:F.57, A:F.57, A:L.61 Hydrogen bonds: A:T.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wacker, D. et al., Conserved Binding Mode of Human beta(2) Adrenergic Receptor Inverse Agonists and Antagonist Revealed by X-ray Crystallography. J.Am.Chem.Soc. (2010)

Release Date

2010-08-11

Peptides

Beta-2 adrenergic receptor, Lysozyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Beta-2 adrenergic receptor, Lysozyme

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