SMTL ID : 3o3z.1

Complex of a chimeric alpha/beta-peptide based on the gp41 CHR domain bound to a gp41 NHR domain peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-3-3-mer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: R.13 Chain F: R.17, L.21, A.24 2 PLIP interactions: 1 interactions with chain F, 1 interactions with chain A Hydrogen bonds: F:R.17, A:R.13 GOL.2: 3 residues within 4Å: Chain B: R.37, E.38, L.39 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.37 GOL.3: 4 residues within 4Å: Chain B: R.17, L.21, A.24 Chain C: R.13 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:R.17, C:R.13 GOL.4: 3 residues within 4Å: Chain D: R.37, E.38, L.39 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:R.37 GOL.5: 4 residues within 4Å: Chain D: R.17, L.21, A.24 Chain E: R.13 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain E Hydrogen bonds: D:R.17, E:R.13 GOL.6: 3 residues within 4Å: Chain F: R.37, E.38, L.39 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:R.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johnson, L.M. et al., Broad Distribution of Energetically Important Contacts across an Extended Protein Interface. J.Am.Chem.Soc. (2011)

Release Date

2011-07-27

Peptides

Envelope glycoprotein gp160: ACE
chimeric alpha/beta peptide based on gp41 CHR domain sequence: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

B
B

D
B

F
B

Envelope glycoprotein gp160

chimeric alpha/beta peptide based on gp41 CHR domain sequence

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