SMTL ID : 3f50.1

HIV gp41 six-helix bundle composed of an alpha/beta-peptide analogue of the CHR domain in complex with an NHR domain alpha-peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-3-3-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: I.29 Chain B: D.8, I.11 Chain E: L.24, T.25 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:L.24, E:T.25 GOL.2: 5 residues within 4Å: Chain A: L.24, T.25 Chain C: I.29 Chain D: D.8, I.11 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.24 GOL.3: 5 residues within 4Å: Chain C: L.24, T.25 Chain E: I.29 Chain F: D.8, I.11 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:L.24, C:T.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horne, W.S. et al., Structural and biological mimicry of protein surface recognition by alpha/beta-peptide foldamers. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-09-15

Peptides

Envelope glycoprotein gp160: ACE
alpha/beta-peptide analogue of the HIV gp41 CHR domain: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

B
B

D
B

F
B

Envelope glycoprotein gp160

alpha/beta-peptide analogue of the HIV gp41 CHR domain

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