SMTL ID : 3olq.1

The crystal structure of a universal stress protein E from Proteus mirabilis HI4320

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: T.53, L.54 No protein-ligand interaction detected (PLIP) GOL.2: 5 residues within 4Å: Chain A: N.164, P.254, L.272, G.273, L.285 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.273 Water bridges: A:A.163, A:S.166, A:G.273 GOL.6: 2 residues within 4Å: Chain B: T.53, L.54 No protein-ligand interaction detected (PLIP) GOL.7: 5 residues within 4Å: Chain B: N.164, P.254, L.272, G.273, L.285 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.273 Water bridges: B:A.163, B:S.166, B:G.273

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 4 residues within 4Å: Chain A: T.247, H.248, K.250, E.264 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.250, A:E.264, A:E.264 Water bridges: A:T.247, A:T.247, A:V.249 PEG.8: 4 residues within 4Å: Chain B: T.247, H.248, K.250, E.264 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.250, B:E.264 Water bridges: B:T.247, B:V.249

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 4 residues within 4Å: Chain A: A.205, P.206, I.207, N.208 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.208 Water bridges: A:N.208 ACT.9: 4 residues within 4Å: Chain B: A.205, P.206, I.207, N.208 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.208 Water bridges: B:N.208

2 x UNL: UNKNOWN LIGAND

UNL.5: 13 residues within 4Å: Chain A: D.19, D.20, Q.21, R.25, Y.29, Q.78, Y.81, Y.82, W.146, W.153, L.186, I.190, Q.191 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:Y.29, A:Y.29, A:W.146, A:W.153, A:W.153, A:W.153, A:W.153, A:L.186, A:I.190, A:I.190 Hydrogen bonds: A:Q.21, A:Q.78, A:Y.82 Water bridges: A:R.25, A:R.25, A:R.25, A:R.26, A:R.26, A:Q.32, A:Y.81, A:W.153 Salt bridges: A:R.25, A:R.25 UNL.10: 13 residues within 4Å: Chain B: D.19, D.20, Q.21, R.25, Y.29, Q.78, Y.81, Y.82, W.146, W.153, L.186, I.190, Q.191 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:Y.29, B:Y.29, B:W.146, B:W.153, B:W.153, B:W.153, B:W.153, B:L.186, B:I.190, B:I.190 Hydrogen bonds: B:Q.21, B:Q.78, B:Y.82 Water bridges: B:R.25, B:R.25, B:R.25, B:R.26, B:R.26, B:Q.32, B:Y.81, B:W.153 Salt bridges: B:R.25, B:R.25

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of a universal stress protein E from Proteus mirabilis HI4320. To be Published

Release Date

2010-09-22

Peptides

Universal stress protein E: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Universal stress protein E

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