SMTL ID : 3otq.1

Soluble Epoxide Hydrolase in complex with pyrazole antagonist

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

2 x MZL: N-[4-(5-ethyl-3-pyridin-3-yl-1H-pyrazol-1-yl)phenyl]pyridine-3-carboxamide(Non-covalent)

MZL.1: 18 residues within 4Å: Chain A: F.267, D.335, W.336, M.339, Y.383, S.407, L.408, R.410, A.411, S.415, L.417, M.419, L.428, Y.466, V.498, L.499, H.524, W.525 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.408, A:R.410, A:L.417, A:L.428, A:V.498 Hydrogen bonds: A:D.335, A:Y.383, A:Y.466 pi-Stacking: A:W.336, A:W.336, A:H.524 MZL.2: 18 residues within 4Å: Chain B: F.267, D.335, W.336, M.339, Y.383, S.407, L.408, R.410, A.411, S.415, L.417, M.419, L.428, Y.466, V.498, L.499, H.524, W.525 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:L.408, B:R.410, B:L.417, B:L.428, B:V.498 Hydrogen bonds: B:D.335, B:D.335 pi-Stacking: B:W.336, B:W.336, B:H.524

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lo, H.Y. et al., Substituted pyrazoles as novel sEH antagonist: investigation of key binding interactions within the catalytic domain. Bioorg.Med.Chem.Lett. (2010)

Release Date

2010-10-27

Peptides

Epoxide hydrolase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Epoxide hydrolase 2

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