SMTL ID : 3p6t.1

Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC2-C8-Dans

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 25 residues within 4Å: Chain A: P.100, T.101, Q.108, R.112, L.244, L.245, G.248, G.249, T.252, V.253, F.256, L.294, V.295, D.297, R.299, Q.322, T.349, F.350, G.351, H.355, C.357, L.358, G.359, A.363 Ligands: SBF.3 22 PLIP interactions: 22 interactions with chain A, Hydrophobic interactions: A:T.101, A:L.245, A:T.252, A:F.256, A:L.294, A:V.295, A:Q.322, A:T.349, A:F.350, A:F.350 Hydrogen bonds: A:Q.108, A:Q.322 Water bridges: A:S.83, A:R.299, A:H.352, A:H.355 Salt bridges: A:R.112, A:R.299, A:H.355, A:H.355 pi-Stacking: A:F.350 Metal complexes: A:C.357

1 x K: POTASSIUM ION(Non-covalent)

K.2: 4 residues within 4Å: Chain A: E.84, G.93, E.94, Y.96 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.84, A:G.93, A:Y.96

1 x SBF: N-[8-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)octyl]-2-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]acetamide(Non-covalent)

SBF.3: 17 residues within 4Å: Chain A: Y.29, N.59, F.87, P.89, Y.96, F.98, T.101, T.185, L.244, V.247, G.248, T.252, V.295, D.297, I.395, V.396 Ligands: HEM.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.29, A:F.87, A:P.89, A:T.101, A:T.185, A:V.247, A:T.252, A:V.295, A:I.395, A:V.396 Hydrogen bonds: A:Y.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, Y.-T. et al., Crystal Structure of Cytochrome P450cam crystallized in the presence of a tethered substrate analog AdaC2-C8-Dans. To be Published

Release Date

2010-11-17

Peptides

Camphor 5-monooxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Camphor 5-monooxygenase

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