SMTL ID : 3phe.4 (3 other biounits)

HCV NS5B with a bound quinolone inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x C9A: 4-chlorobenzyl 6-fluoro-7-(4-methylpiperazin-1-yl)-1-[4-(methylsulfonyl)benzyl]-4-oxo-1,4-dihydroquinoline-3-carboxylate(Non-covalent)

C9A.1: 17 residues within 4Å: Chain A: L.425, R.428, M.429, L.480, H.481, S.482, Y.483, S.484, P.485, I.488, N.489, V.491, A.492, L.495, P.502, L.503, W.534 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.425, A:I.488, A:I.488, A:L.503, A:L.503, A:L.503, A:W.534, A:W.534 Hydrogen bonds: A:S.482, A:Y.483

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, D.V. et al., Quinolones as HCV NS5B polymerase inhibitors. Bioorg.Med.Chem.Lett. (2011)

Release Date

2010-11-17

Peptides

HCV encoded nonstructural 5B protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

HCV encoded nonstructural 5B protein

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