- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x GLV: GLYOXYLIC ACID(Non-covalent)
- 6 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 5 residues within 4Å:- Chain A: D.52, E.158, D.192
- Ligands: GLV.1, K.9
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.52, A:E.158, A:D.192, H2O.2
MG.12: 5 residues within 4Å:- Chain B: D.52, E.158, D.192
- Ligands: GLV.11, K.19
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.52, B:E.158, B:D.192, H2O.5
MG.22: 5 residues within 4Å:- Chain C: D.52, E.158, D.192
- Ligands: GLV.21, K.29
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:D.52, C:E.158, C:D.192, H2O.8
MG.32: 5 residues within 4Å:- Chain D: D.52, E.158, D.192
- Ligands: GLV.31, K.39
4 PLIP interactions:3 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:D.52, D:E.158, D:D.192, H2O.10
MG.42: 5 residues within 4Å:- Chain E: D.52, E.158, D.192
- Ligands: GLV.41, K.49
4 PLIP interactions:3 interactions with chain E, 1 Ligand-Water interactions- Metal complexes: E:D.52, E:E.158, E:D.192, H2O.13
MG.52: 5 residues within 4Å:- Chain F: D.52, E.158, D.192
- Ligands: GLV.51, K.59
4 PLIP interactions:3 interactions with chain F, 1 Ligand-Water interactions- Metal complexes: F:D.52, F:E.158, F:D.192, H2O.16
- 24 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 6 residues within 4Å:- Chain A: R.4, V.226, A.227, G.252
- Chain B: R.198
- Ligands: K.8
Ligand excluded by PLIPCL.4: 5 residues within 4Å:- Chain A: R.89, D.90, S.91, P.92, R.95
Ligand excluded by PLIPCL.5: 2 residues within 4Å:- Chain A: P.207, A.208
Ligand excluded by PLIPCL.6: 5 residues within 4Å:- Chain A: R.218
- Chain B: R.218
- Chain C: R.218
- Ligands: CL.16, CL.26
Ligand excluded by PLIPCL.13: 6 residues within 4Å:- Chain B: R.4, V.226, A.227, G.252
- Chain C: R.198
- Ligands: K.18
Ligand excluded by PLIPCL.14: 5 residues within 4Å:- Chain B: R.89, D.90, S.91, P.92, R.95
Ligand excluded by PLIPCL.15: 2 residues within 4Å:- Chain B: P.207, A.208
Ligand excluded by PLIPCL.16: 5 residues within 4Å:- Chain A: R.218
- Chain B: R.218
- Chain C: R.218
- Ligands: CL.6, CL.26
Ligand excluded by PLIPCL.23: 6 residues within 4Å:- Chain A: R.198
- Chain C: R.4, V.226, A.227, G.252
- Ligands: K.28
Ligand excluded by PLIPCL.24: 5 residues within 4Å:- Chain C: R.89, D.90, S.91, P.92, R.95
Ligand excluded by PLIPCL.25: 2 residues within 4Å:- Chain C: P.207, A.208
Ligand excluded by PLIPCL.26: 5 residues within 4Å:- Chain A: R.218
- Chain B: R.218
- Chain C: R.218
- Ligands: CL.6, CL.16
Ligand excluded by PLIPCL.33: 6 residues within 4Å:- Chain D: R.4, V.226, A.227, G.252
- Chain E: R.198
- Ligands: K.38
Ligand excluded by PLIPCL.34: 5 residues within 4Å:- Chain D: R.89, D.90, S.91, P.92, R.95
Ligand excluded by PLIPCL.35: 2 residues within 4Å:- Chain D: P.207, A.208
Ligand excluded by PLIPCL.36: 5 residues within 4Å:- Chain D: R.218
- Chain E: R.218
- Chain F: R.218
- Ligands: CL.46, CL.56
Ligand excluded by PLIPCL.43: 6 residues within 4Å:- Chain E: R.4, V.226, A.227, G.252
- Chain F: R.198
- Ligands: K.48
Ligand excluded by PLIPCL.44: 5 residues within 4Å:- Chain E: R.89, D.90, S.91, P.92, R.95
Ligand excluded by PLIPCL.45: 2 residues within 4Å:- Chain E: P.207, A.208
Ligand excluded by PLIPCL.46: 5 residues within 4Å:- Chain D: R.218
- Chain E: R.218
- Chain F: R.218
- Ligands: CL.36, CL.56
Ligand excluded by PLIPCL.53: 6 residues within 4Å:- Chain D: R.198
- Chain F: R.4, V.226, A.227, G.252
- Ligands: K.58
Ligand excluded by PLIPCL.54: 5 residues within 4Å:- Chain F: R.89, D.90, S.91, P.92, R.95
Ligand excluded by PLIPCL.55: 2 residues within 4Å:- Chain F: P.207, A.208
Ligand excluded by PLIPCL.56: 5 residues within 4Å:- Chain D: R.218
- Chain E: R.218
- Chain F: R.218
- Ligands: CL.36, CL.46
Ligand excluded by PLIP- 24 x K: POTASSIUM ION(Non-covalent)
K.7: 5 residues within 4Å:- Chain A: M.173, G.174, K.175, N.178, E.181
Ligand excluded by PLIPK.8: 5 residues within 4Å:- Chain A: S.217, S.221, G.252
- Chain B: M.197
- Ligands: CL.3
Ligand excluded by PLIPK.9: 5 residues within 4Å:- Chain A: E.51, D.52, E.123, D.192
- Ligands: MG.2
Ligand excluded by PLIPK.10: 3 residues within 4Å:- Chain A: P.176, N.178, N.179
Ligand excluded by PLIPK.17: 5 residues within 4Å:- Chain B: M.173, G.174, K.175, N.178, E.181
Ligand excluded by PLIPK.18: 5 residues within 4Å:- Chain B: S.217, S.221, G.252
- Chain C: M.197
- Ligands: CL.13
Ligand excluded by PLIPK.19: 5 residues within 4Å:- Chain B: E.51, D.52, E.123, D.192
- Ligands: MG.12
Ligand excluded by PLIPK.20: 3 residues within 4Å:- Chain B: P.176, N.178, N.179
Ligand excluded by PLIPK.27: 5 residues within 4Å:- Chain C: M.173, G.174, K.175, N.178, E.181
Ligand excluded by PLIPK.28: 5 residues within 4Å:- Chain A: M.197
- Chain C: S.217, S.221, G.252
- Ligands: CL.23
Ligand excluded by PLIPK.29: 5 residues within 4Å:- Chain C: E.51, D.52, E.123, D.192
- Ligands: MG.22
Ligand excluded by PLIPK.30: 3 residues within 4Å:- Chain C: P.176, N.178, N.179
Ligand excluded by PLIPK.37: 5 residues within 4Å:- Chain D: M.173, G.174, K.175, N.178, E.181
Ligand excluded by PLIPK.38: 5 residues within 4Å:- Chain D: S.217, S.221, G.252
- Chain E: M.197
- Ligands: CL.33
Ligand excluded by PLIPK.39: 5 residues within 4Å:- Chain D: E.51, D.52, E.123, D.192
- Ligands: MG.32
Ligand excluded by PLIPK.40: 3 residues within 4Å:- Chain D: P.176, N.178, N.179
Ligand excluded by PLIPK.47: 5 residues within 4Å:- Chain E: M.173, G.174, K.175, N.178, E.181
Ligand excluded by PLIPK.48: 5 residues within 4Å:- Chain E: S.217, S.221, G.252
- Chain F: M.197
- Ligands: CL.43
Ligand excluded by PLIPK.49: 5 residues within 4Å:- Chain E: E.51, D.52, E.123, D.192
- Ligands: MG.42
Ligand excluded by PLIPK.50: 3 residues within 4Å:- Chain E: P.176, N.178, N.179
Ligand excluded by PLIPK.57: 5 residues within 4Å:- Chain F: M.173, G.174, K.175, N.178, E.181
Ligand excluded by PLIPK.58: 5 residues within 4Å:- Chain D: M.197
- Chain F: S.217, S.221, G.252
- Ligands: CL.53
Ligand excluded by PLIPK.59: 5 residues within 4Å:- Chain F: E.51, D.52, E.123, D.192
- Ligands: MG.52
Ligand excluded by PLIPK.60: 3 residues within 4Å:- Chain F: P.176, N.178, N.179
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bracken, C.D. et al., Crystal structures of a halophilic archaeal malate synthase from Haloferax volcanii and comparisons with isoforms A and G. Bmc Struct.Biol. (2011)
- Release Date
- 2011-06-01
- Peptides
- Malate Synthase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x GLV: GLYOXYLIC ACID(Non-covalent)
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 24 x CL: CHLORIDE ION(Non-functional Binders)
- 24 x K: POTASSIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bracken, C.D. et al., Crystal structures of a halophilic archaeal malate synthase from Haloferax volcanii and comparisons with isoforms A and G. Bmc Struct.Biol. (2011)
- Release Date
- 2011-06-01
- Peptides
- Malate Synthase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A