SMTL ID : 3puh.1

Cocaine Esterase, wild-type biologically active dimer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: N.197, D.198, V.199, F.408, H.409, N.410 Chain B: R.293, K.298 9 PLIP interactions: 4 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:R.293, B:R.293, B:K.298, B:K.298, A:V.199, A:F.408, A:H.409, A:N.410 Water bridges: A:G.411 GOL.2: 2 residues within 4Å: Chain A: V.554, R.556 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.556 GOL.6: 8 residues within 4Å: Chain A: R.293, K.298 Chain B: L.196, N.197, V.199, F.408, H.409, N.410 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:V.199, B:F.408, B:N.410, A:R.293, A:K.298 Water bridges: B:G.411

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 2 residues within 4Å: Chain A: L.247, A.248 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.135 SO4.4: 2 residues within 4Å: Chain A: D.296 Chain B: D.296 No protein-ligand interaction detected (PLIP) SO4.5: 4 residues within 4Å: Chain A: D.65, D.319, R.323, E.325 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.65, A:R.323 SO4.7: 4 residues within 4Å: Chain B: D.65, D.319, R.323, E.325 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:K.315, B:R.323

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Narasimhan, D. et al., Subunit stabilization and polyethylene glycolation of cocaine esterase improves in vivo residence time. Mol.Pharmacol. (2011)

Release Date

2011-09-21

Peptides

Cocaine esterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cocaine esterase

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