SMTL ID : 3q0w.1

ETHR From mycobacterium tuberculosis in complex with compound BDM33066

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x LL5: (2S)-2-amino-3-methyl-1-{4-[3-(thiophen-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}butan-1-one(Non-covalent)

LL5.1: 16 residues within 4Å: Chain A: L.107, L.110, P.114, M.122, W.123, G.126, I.127, F.130, Y.168, T.169, V.172, E.176, N.196, W.227, Y.232 Ligands: GOL.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.110, A:M.122, A:W.123, A:W.123, A:F.130, A:Y.168, A:E.176, A:W.227 LL5.3: 16 residues within 4Å: Chain B: L.107, L.110, P.114, M.122, W.123, G.126, I.127, F.130, Y.168, T.169, V.172, E.176, N.196, W.227, Y.232 Ligands: GOL.4 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.110, B:M.122, B:W.123, B:W.123, B:F.130, B:Y.168, B:E.176, B:W.227

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: F.130, F.134, W.158, W.165, N.196, N.199, E.200 Ligands: LL5.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.199 GOL.4: 8 residues within 4Å: Chain B: F.130, F.134, W.158, W.165, N.196, N.199, E.200 Ligands: LL5.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carette, X. et al., Structural activation of the transcriptional repressor EthR from Mycobacterium tuberculosis by single amino acid change mimicking natural and synthetic ligands. Nucleic Acids Res. (2012)

Release Date

2011-12-21

Peptides

HTH-type transcriptional regulator EthR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HTH-type transcriptional regulator EthR

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