SMTL ID : 3qiu.1

Crystal structure of the 226 TCR in complex with MCC/I-Ek

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.116, D.164, H.165, W.166 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:W.166 NAG.2: 2 residues within 4Å: Chain B: N.17, Q.20 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.17, B:Q.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newell, E.W. et al., Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k). J.Immunol. (2011)

Release Date

2011-04-27

Peptides

H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, E-K alpha chain: A
MHC CLASS II H2-IA-BETA CHAIN: B
TCR 226 alpha chain: C
TCR 226 beta chain: D
MCC peptide: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, E-K alpha chain

MHC CLASS II H2-IA-BETA CHAIN

TCR 226 alpha chain

TCR 226 beta chain

MCC peptide

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