SMTL ID : 3qiw.1

Crystal structure of the 226 TCR in complex with MCC-p5E/I-Ek

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain C: N.118, D.166, H.167, W.168 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:W.168 Hydrogen bonds: C:W.168 NAG.2: 2 residues within 4Å: Chain D: N.17, Q.20 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:N.17, D:Q.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newell, E.W. et al., Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k). J.Immunol. (2011)

Release Date

2011-04-27

Peptides

TCR 226 alpha chain: A
TCR 226 beta chain: B
H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, E-K alpha chain: C
MHC CLASS II H2-IA-BETA CHAIN: D
MCC-p5E peptide: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
A

D
B

E
E

TCR 226 alpha chain

TCR 226 beta chain

H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, E-K alpha chain

MHC CLASS II H2-IA-BETA CHAIN

MCC-p5E peptide

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