- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x QV6: 3-({4-[(2,4-dimethyl-5-sulfophenyl)amino]-9,10-dioxo-9,10-dihydroanthracen-1-yl}amino)-2,4,6-trimethylbenzenesulfonic acid(Non-functional Binders)(Non-covalent)
- 8 x K: POTASSIUM ION(Non-covalent)
K.3: 6 residues within 4Å:- Chain A: N.52, S.54, D.84, T.85, S.212, K.239
No protein-ligand interaction detected (PLIP)K.4: 4 residues within 4Å:- Chain A: Q.355, S.356, L.358, E.360
No protein-ligand interaction detected (PLIP)K.6: 6 residues within 4Å:- Chain B: N.52, S.54, D.84, T.85, S.212, K.239
No protein-ligand interaction detected (PLIP)K.7: 4 residues within 4Å:- Chain B: Q.355, S.356, L.358, E.360
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:Q.355, B:L.358, H2O.5
K.11: 6 residues within 4Å:- Chain C: N.52, S.54, D.84, T.85, S.212, K.239
No protein-ligand interaction detected (PLIP)K.12: 4 residues within 4Å:- Chain C: Q.355, S.356, L.358, E.360
No protein-ligand interaction detected (PLIP)K.14: 6 residues within 4Å:- Chain D: N.52, S.54, D.84, T.85, S.212, K.239
No protein-ligand interaction detected (PLIP)K.15: 4 residues within 4Å:- Chain D: Q.355, S.356, L.358, E.360
3 PLIP interactions:2 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:Q.355, D:L.358, H2O.9
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.5: 9 residues within 4Å:- Chain A: L.400, S.401, N.402, T.403, G.404, R.405, S.406, A.482, D.483
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:L.400, A:N.402, A:T.403, A:T.403, A:T.403, A:G.404, A:R.405, A:S.406, A:S.406
PO4.8: 9 residues within 4Å:- Chain B: L.400, S.401, N.402, T.403, G.404, R.405, S.406, A.482, D.483
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:L.400, B:S.401, B:N.402, B:T.403, B:T.403, B:T.403, B:G.404, B:R.405, B:S.406
PO4.13: 9 residues within 4Å:- Chain C: L.400, S.401, N.402, T.403, G.404, R.405, S.406, A.482, D.483
10 PLIP interactions:10 interactions with chain C- Hydrogen bonds: C:L.400, C:N.402, C:T.403, C:T.403, C:T.403, C:G.404, C:R.405, C:S.406, C:S.406, C:D.483
PO4.16: 9 residues within 4Å:- Chain D: L.400, S.401, N.402, T.403, G.404, R.405, S.406, A.482, D.483
10 PLIP interactions:10 interactions with chain D- Hydrogen bonds: D:L.400, D:S.401, D:N.402, D:T.403, D:T.403, D:G.404, D:R.405, D:S.406
- Water bridges: D:T.403, D:T.403
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Morgan, H.P. et al., The trypanocidal drug suramin and other trypan blue mimetics are inhibitors of pyruvate kinases and bind to the adenosine site. J.Biol.Chem. (2011)
- Release Date
- 2011-06-29
- Peptides
- Pyruvate kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
DC
AD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.85 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x QV6: 3-({4-[(2,4-dimethyl-5-sulfophenyl)amino]-9,10-dioxo-9,10-dihydroanthracen-1-yl}amino)-2,4,6-trimethylbenzenesulfonic acid(Non-functional Binders)(Non-covalent)
- 8 x K: POTASSIUM ION(Non-covalent)
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Morgan, H.P. et al., The trypanocidal drug suramin and other trypan blue mimetics are inhibitors of pyruvate kinases and bind to the adenosine site. J.Biol.Chem. (2011)
- Release Date
- 2011-06-29
- Peptides
- Pyruvate kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
DC
AD
D