SMTL ID : 3r54.1

Human Cyclophilin D Complexed with a Fragment

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x FP6: pyrrolidine-1-carbaldehyde(Non-covalent)

FP6.1: 9 residues within 4Å: Chain A: R.56, F.61, M.62, Q.64, A.102, N.103, F.114, L.123, H.127 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.61, A:F.114, A:L.123 Hydrogen bonds: A:N.103 Water bridges: A:R.56, A:R.56, A:Q.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ahmed-Belkacem, A. et al., Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities. Nat Commun (2016)

Release Date

2012-03-21

Peptides

Peptidyl-prolyl cis-trans isomerase F, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase F, mitochondrial

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