SMTL ID : 3r5u.1

The structure of manganese bound Thermococcus thioreducens Inorganic pyrophosphatase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

homo-hexamer

Ligands

6 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 3 residues within 4Å: Chain A: D.66, D.71, D.103 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.66, A:D.103, H2O.2, H2O.3, H2O.4 MN.2: 3 residues within 4Å: Chain B: D.66, D.71, D.103 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.66, B:D.71, H2O.10, H2O.11, H2O.12 MN.3: 3 residues within 4Å: Chain C: D.66, D.71, D.103 5 PLIP interactions: 2 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:D.66, C:D.103, H2O.18, H2O.19, H2O.20 MN.4: 3 residues within 4Å: Chain D: D.66, D.71, D.103 5 PLIP interactions: 2 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:D.66, D:D.71, H2O.27, H2O.27, H2O.28 MN.5: 3 residues within 4Å: Chain E: D.66, D.71, D.103 5 PLIP interactions: 2 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:D.66, E:D.103, H2O.35, H2O.35, H2O.36 MN.6: 3 residues within 4Å: Chain F: D.66, D.71, D.103 5 PLIP interactions: 2 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:D.66, F:D.71, H2O.43, H2O.43, H2O.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hughes, R.C. et al., The structure of manganese bound Thermococcus thioreducens Inorganic pyrophosphatase. To be Published

Release Date

2012-03-28

Peptides

Tt-IPPase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

Tt-IPPase

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