SMTL ID : 3r67.3 (3 other biounits)

Crystal structure of a putative glycosidase (BT_4094) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.30 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: R.68, I.77, K.178 Ligands: EDO.2, EDO.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.68, A:R.68 Water bridges: A:K.178, A:K.178, A:E.206 EDO.2: 6 residues within 4Å: Chain A: N.53, Y.282, Y.318, T.322, D.343 Ligands: EDO.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.53 Water bridges: A:Y.318, A:T.322 EDO.3: 5 residues within 4Å: Chain A: K.232, V.233, I.234, T.235, R.300 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.232, A:T.235, A:R.300 Water bridges: A:T.235, A:T.235 EDO.4: 5 residues within 4Å: Chain A: E.120, W.139, A.144, K.178 Ligands: EDO.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.120, A:K.178 Water bridges: A:E.120 EDO.5: 8 residues within 4Å: Chain A: A.56, T.57, V.124, A.125, V.126, Q.191, P.251, L.328 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.57, A:V.126, A:Q.191 Water bridges: A:I.58, A:L.328 EDO.6: 6 residues within 4Å: Chain A: S.49, D.71, N.72, A.74, V.75, R.80 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.49, A:A.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a putative glycosidase (BT_4094) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.30 A resolution. To be published

Release Date

2011-04-13

Peptides

putative Glycosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

putative Glycosidase

Related Entries With Identical Sequence