SMTL ID : 3r8r.2 (1 other biounit)

Transaldolase from Bacillus subtilis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-10-mer

Ligands

10 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.133, S.165, R.167 Ligands: GOL.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.165 Salt bridges: A:R.133, A:R.167 SO4.3: 3 residues within 4Å: Chain B: R.133, S.165, R.167 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.165 Salt bridges: B:R.133, B:R.167 SO4.4: 4 residues within 4Å: Chain C: R.133, S.165, R.167 Ligands: GOL.5 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:S.165 Water bridges: C:R.133 Salt bridges: C:R.133, C:R.167 SO4.6: 3 residues within 4Å: Chain D: R.133, S.165, R.167 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:S.165 Salt bridges: D:R.133, D:R.167 SO4.7: 3 residues within 4Å: Chain E: R.133, S.165, R.167 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:S.165 Salt bridges: E:R.133, E:R.167 SO4.8: 4 residues within 4Å: Chain F: R.133, S.165, R.167 Ligands: GOL.9 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:S.165 Salt bridges: F:R.133, F:R.167 SO4.10: 3 residues within 4Å: Chain G: R.133, S.165, R.167 6 PLIP interactions: 6 interactions with chain G Hydrogen bonds: G:S.165 Water bridges: G:R.133, G:R.133, G:R.133 Salt bridges: G:R.133, G:R.167 SO4.11: 4 residues within 4Å: Chain H: R.133, S.165, R.167 Ligands: GOL.12 3 PLIP interactions: 3 interactions with chain H Hydrogen bonds: H:S.165 Salt bridges: H:R.133, H:R.167 SO4.13: 3 residues within 4Å: Chain I: R.133, S.165, R.167 4 PLIP interactions: 4 interactions with chain I Hydrogen bonds: I:S.165 Water bridges: I:S.165 Salt bridges: I:R.133, I:R.167 SO4.14: 4 residues within 4Å: Chain J: R.133, S.165, R.167 Ligands: GOL.15 3 PLIP interactions: 3 interactions with chain J Hydrogen bonds: J:S.165 Salt bridges: J:R.133, J:R.167

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: D.6, N.28, K.84, F.130, R.133, A.164, S.165, T.184 Ligands: SO4.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:T.26, A:N.28, A:K.84, A:K.84, A:R.133, A:S.165 Water bridges: A:D.6, A:N.28, A:I.166 GOL.5: 7 residues within 4Å: Chain C: D.6, N.28, K.84, F.130, A.164, S.165 Ligands: SO4.4 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:N.28, C:K.84, C:K.84, C:R.133, C:S.165 Water bridges: C:D.6, C:I.166 GOL.9: 10 residues within 4Å: Chain F: D.6, N.28, L.31, K.84, F.130, R.133, A.164, S.165, T.184 Ligands: SO4.8 7 PLIP interactions: 7 interactions with chain F Hydrogen bonds: F:D.6, F:N.28, F:K.84, F:K.84, F:R.133, F:S.165 Water bridges: F:I.166 GOL.12: 8 residues within 4Å: Chain H: D.6, N.28, K.84, F.130, R.133, A.164, S.165 Ligands: SO4.11 8 PLIP interactions: 8 interactions with chain H Hydrogen bonds: H:D.6, H:T.26, H:N.28, H:K.84, H:K.84, H:R.133, H:S.165 Water bridges: H:I.166 GOL.15: 8 residues within 4Å: Chain J: D.6, T.26, N.28, K.84, F.130, A.164, S.165 Ligands: SO4.14 8 PLIP interactions: 8 interactions with chain J Hydrogen bonds: J:N.28, J:K.84, J:K.84, J:R.133, J:S.165 Water bridges: J:D.6, J:T.108, J:I.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Samland, A.K. et al., Conservation of structure and mechanism within the transaldolase enzyme family. Febs J. (2012)

Release Date

2012-02-08

Peptides

Transaldolase: ABCDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
V

B
K

C
L

D
M

E
N

F
W

G
P

H
R

I
T

J
U

Transaldolase

Related Entries With Identical Sequence