SMTL ID : 3rcg.1

Human cyclophilin D complexed with dimethylformamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.97 Å

Oligo State

monomer

Ligands

1 x DMF: DIMETHYLFORMAMIDE(Non-covalent)

DMF.1: 9 residues within 4Å: Chain A: R.56, F.61, M.62, Q.64, A.102, N.103, F.114, L.123, H.127 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.103 Water bridges: A:Q.64

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: R.20 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ahmed-Belkacem, A. et al., Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities. Nat Commun (2016)

Release Date

2012-03-21

Peptides

Peptidyl-prolyl cis-trans isomerase F, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase F, mitochondrial

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