SMTL ID : 3rco.4 (3 other biounits)

Crystal structure of a conserved motif in human TDRD7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-trimer

Ligands

24 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: L.31, P.32, E.76, I.77 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: V.63, P.64, A.65 Ligand excluded by PLIP CL.3: 5 residues within 4Å: Chain A: P.47, F.48, K.49, Q.50 Chain C: Q.50 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: G.28, V.29, A.30, R.33 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain A: K.49 Chain B: K.49 Chain C: K.49 Ligands: CL.13, CL.21 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain A: F.48, T.55, L.56 Ligands: CL.7 Ligand excluded by PLIP CL.7: 4 residues within 4Å: Chain A: T.55, L.56, E.57 Ligands: CL.6 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain A: L.9, E.10, G.11 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain B: L.31, P.32, E.76, I.77 Ligand excluded by PLIP CL.10: 3 residues within 4Å: Chain B: V.63, P.64, A.65 Ligand excluded by PLIP CL.11: 5 residues within 4Å: Chain A: Q.50 Chain B: P.47, F.48, K.49, Q.50 Ligand excluded by PLIP CL.12: 4 residues within 4Å: Chain B: G.28, V.29, A.30, R.33 Ligand excluded by PLIP CL.13: 5 residues within 4Å: Chain A: K.49 Chain B: K.49 Chain C: K.49 Ligands: CL.5, CL.21 Ligand excluded by PLIP CL.14: 4 residues within 4Å: Chain B: F.48, T.55, L.56 Ligands: CL.15 Ligand excluded by PLIP CL.15: 4 residues within 4Å: Chain B: T.55, L.56, E.57 Ligands: CL.14 Ligand excluded by PLIP CL.16: 3 residues within 4Å: Chain B: L.9, E.10, G.11 Ligand excluded by PLIP CL.17: 4 residues within 4Å: Chain C: L.31, P.32, E.76, I.77 Ligand excluded by PLIP CL.18: 3 residues within 4Å: Chain C: V.63, P.64, A.65 Ligand excluded by PLIP CL.19: 5 residues within 4Å: Chain B: Q.50 Chain C: P.47, F.48, K.49, Q.50 Ligand excluded by PLIP CL.20: 4 residues within 4Å: Chain C: G.28, V.29, A.30, R.33 Ligand excluded by PLIP CL.21: 5 residues within 4Å: Chain A: K.49 Chain B: K.49 Chain C: K.49 Ligands: CL.5, CL.13 Ligand excluded by PLIP CL.22: 4 residues within 4Å: Chain C: F.48, T.55, L.56 Ligands: CL.23 Ligand excluded by PLIP CL.23: 4 residues within 4Å: Chain C: T.55, L.56, E.57 Ligands: CL.22 Ligand excluded by PLIP CL.24: 3 residues within 4Å: Chain C: L.9, E.10, G.11 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, C. et al., Crystal structure of a conserved motif in human TDRD7. To be Published

Release Date

2012-04-04

Peptides

Tudor domain-containing protein 7: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

Tudor domain-containing protein 7

Related Entries With Identical Sequence