SMTL ID : 3rez.4 (3 other biounits)

glycoprotein GPIb variant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: G.21, N.41 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.41

3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 3 residues within 4Å: Chain A: T.73, L.77, E.109 No protein-ligand interaction detected (PLIP) PEG.3: 5 residues within 4Å: Chain A: P.47, G.48, A.49, D.51, H.52 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.51 Water bridges: A:G.48, A:A.49 PEG.4: 5 residues within 4Å: Chain A: T.13, V.15, P.29, R.31, T.32 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.13 Water bridges: A:R.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McEwan, P.A. et al., Quaternary organization of GPIb-IX complex and insights into Bernard-Soulier syndrome revealed by the structures of GPIb beta and a GPIb beta/GPIX chimera. Blood (2011)

Release Date

2012-02-15

Peptides

Platelet glycoprotein Ib beta chain, Platelet glycoprotein IX: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Platelet glycoprotein Ib beta chain, Platelet glycoprotein IX

Related Entries With Identical Sequence