SMTL ID : 3rft.1

Crystal structure of uronate dehydrogenase from Agrobacterium tumefaciens

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-hexamer

Ligands

30 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: K.4, R.5 Ligand excluded by PLIP SO4.2: 3 residues within 4Å: Chain A: R.22, H.182, D.183 Ligand excluded by PLIP SO4.3: 6 residues within 4Å: Chain A: N.112, H.113, G.164, S.165, R.174, F.258 Ligand excluded by PLIP SO4.4: 2 residues within 4Å: Chain A: R.148, F.151 Ligand excluded by PLIP SO4.5: 3 residues within 4Å: Chain B: A.63, G.64, H.101 Ligand excluded by PLIP SO4.6: 2 residues within 4Å: Chain B: K.4, R.5 Ligand excluded by PLIP SO4.7: 3 residues within 4Å: Chain B: R.22, H.182, D.183 Ligand excluded by PLIP SO4.8: 3 residues within 4Å: Chain B: K.78, Q.82, Q.266 Ligand excluded by PLIP SO4.9: 6 residues within 4Å: Chain B: N.112, H.113, G.164, S.165, R.174, F.258 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain B: R.148, F.151 Ligand excluded by PLIP SO4.11: 2 residues within 4Å: Chain C: K.4, R.5 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain C: A.63, G.64, H.101 Ligand excluded by PLIP SO4.13: 2 residues within 4Å: Chain C: R.22, H.182 Ligand excluded by PLIP SO4.14: 6 residues within 4Å: Chain C: N.112, H.113, G.164, S.165, R.174, F.258 Ligand excluded by PLIP SO4.15: 2 residues within 4Å: Chain C: R.148, F.151 Ligand excluded by PLIP SO4.16: 2 residues within 4Å: Chain D: K.4, R.5 Ligand excluded by PLIP SO4.17: 3 residues within 4Å: Chain D: R.22, H.182, D.183 Ligand excluded by PLIP SO4.18: 6 residues within 4Å: Chain D: N.112, H.113, G.164, S.165, R.174, F.258 Ligand excluded by PLIP SO4.19: 2 residues within 4Å: Chain D: R.148, F.151 Ligand excluded by PLIP SO4.20: 3 residues within 4Å: Chain E: A.63, G.64, H.101 Ligand excluded by PLIP SO4.21: 2 residues within 4Å: Chain E: K.4, R.5 Ligand excluded by PLIP SO4.22: 3 residues within 4Å: Chain E: R.22, H.182, D.183 Ligand excluded by PLIP SO4.23: 3 residues within 4Å: Chain E: K.78, Q.82, Q.266 Ligand excluded by PLIP SO4.24: 6 residues within 4Å: Chain E: N.112, H.113, G.164, S.165, R.174, F.258 Ligand excluded by PLIP SO4.25: 2 residues within 4Å: Chain E: R.148, F.151 Ligand excluded by PLIP SO4.26: 2 residues within 4Å: Chain F: K.4, R.5 Ligand excluded by PLIP SO4.27: 3 residues within 4Å: Chain F: A.63, G.64, H.101 Ligand excluded by PLIP SO4.28: 2 residues within 4Å: Chain F: R.22, H.182 Ligand excluded by PLIP SO4.29: 6 residues within 4Å: Chain F: N.112, H.113, G.164, S.165, R.174, F.258 Ligand excluded by PLIP SO4.30: 2 residues within 4Å: Chain F: R.148, F.151 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parkkinen, T. et al., Crystal Structure of Uronate Dehydrogenase from Agrobacterium tumefaciens. J.Biol.Chem. (2011)

Release Date

2011-06-15

Peptides

Uronate dehydrogenase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Uronate dehydrogenase

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