SMTL ID : 3rig.1 (1 other biounit)

Sirt5 is an NAD-dependent protein lysine demalonylase and desuccinylase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.137, C.140, C.178, C.183 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.137, A:C.140, A:C.178, A:C.183

1 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)

NHE.2: 12 residues within 4Å: Chain A: G.45, A.53, Q.54, A.57, F.72, Y.73, R.76, I.113, V.191, F.194, V.225 Chain B: X.6 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Q.54, A:F.194, A:V.225 Hydrogen bonds: A:Y.73 Salt bridges: A:R.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Du, J. et al., Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase. Science (2011)

Release Date

2011-11-23

Peptides

NAD-dependent deacetylase sirtuin-5: A
peptide of histone 3 thioacetyl-lysine 9: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

NAD-dependent deacetylase sirtuin-5

peptide of histone 3 thioacetyl-lysine 9

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