SMTL ID : 3s5j.1

2.0A Crystal structure of human phosphoribosyl pyrophosphate synthetase 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.308, V.309, S.310 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.308, A:V.309, A:S.310, A:S.310 SO4.2: 6 residues within 4Å: Chain A: A.223, D.224, T.225, C.226, G.227, T.228 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.224, A:T.225, A:T.225, A:C.226, A:G.227, A:T.228, A:T.228 Water bridges: A:I.229 SO4.3: 4 residues within 4Å: Chain A: S.132, Q.135, N.144, Y.146 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.132, A:Q.135, A:N.144, A:Y.146, A:Y.146 SO4.4: 4 residues within 4Å: Chain B: E.307, S.308, V.309, S.310 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:V.309, B:S.310, B:S.310 SO4.5: 5 residues within 4Å: Chain B: D.224, T.225, C.226, G.227, T.228 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:D.224, B:T.225, B:T.225, B:C.226, B:G.227, B:T.228 SO4.6: 4 residues within 4Å: Chain B: S.132, Q.135, N.144, Y.146 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.132, B:S.132, B:Q.135, B:N.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, P. et al., Crystal and EM Structures of Human Phosphoribosyl Pyrophosphate Synthase I (PRS1) Provide Novel Insights into the Disease-Associated Mutations. Plos One (2015)

Release Date

2012-05-23

Peptides

Ribose-phosphate pyrophosphokinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Ribose-phosphate pyrophosphokinase 1

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