SMTL ID : 3s88.5 (4 other biounits)

Crystal structure of Sudan Ebolavirus Glycoprotein (strain Gulu) bound to 16F6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.35 Å

Oligo State

hetero-3-3-3-3-mer

Ligands

6 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: Y.202, L.203, E.204, F.239, N.242, H.246 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 6 residues within 4Å: Chain B: Y.202, L.203, E.204, F.239, N.242, H.246 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 6 residues within 4Å: Chain C: Y.202, L.203, E.204, F.239, N.242, H.246 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 2 residues within 4Å: Chain E: N.91, T.94 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 2 residues within 4Å: Chain H: N.91, T.94 No protein-ligand interaction detected (PLIP) NAG-NAG.6: 2 residues within 4Å: Chain K: N.91, T.94 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dias, J.M. et al., A shared structural solution for neutralizing ebolaviruses. Nat.Struct.Mol.Biol. (2011)

Release Date

2011-12-07

Peptides

Envelope glycoprotein: ABC
16F6 - Heavy chain: DGJ
Envelope glycoprotein: EHK
16F6 - Light chain: FIL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
I

C
I

D
H

G
H

J
H

E
J

H
J

K
J

F
L

I
L

L
L

Envelope glycoprotein

16F6 - Heavy chain

Envelope glycoprotein

16F6 - Light chain

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