SMTL ID : 3s8l.1

Protein-Ligand Interactions: Thermodynamic Effects Associated with Increasing Hydrophobic Surface Area

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x ACE- PTR- 192- ASN- NH2: pYAc4cN(Non-covalent)

ACE-PTR-192-ASN-NH2.1: 10 residues within 4Å: Chain A: R.15, R.34, S.36, S.38, S.44, H.55, F.56, K.57, L.68, W.69 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:H.55, A:F.56, A:K.57, A:W.69 Hydrogen bonds: A:R.15, A:R.15, A:S.38, A:S.38, A:S.44, A:H.55, A:K.57, A:K.57 Water bridges: A:R.34, A:E.37, A:H.55, A:H.55, A:K.57, A:K.57 Salt bridges: A:R.15, A:R.34 pi-Cation interactions: A:R.15

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: T.86, S.87, Q.93 Ligand excluded by PLIP

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: S.23, Q.25, R.26, K.48 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.23, A:K.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Myslinski, J.M. et al., Protein-ligand interactions: thermodynamic effects associated with increasing nonpolar surface area. J.Am.Chem.Soc. (2011)

Release Date

2011-11-02

Peptides

Growth factor receptor-bound protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Growth factor receptor-bound protein 2

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