SMTL ID : 3s95.2 (1 other biounit)

Crystal structure of the human LIMK1 kinase domain in complex with staurosporine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x STU: STAUROSPORINE(Non-covalent)

STU.1: 16 residues within 4Å: Chain A: L.18, G.19, A.26, V.39, K.41, E.57, L.70, T.86, E.87, Y.88, I.89, G.92, T.93, H.137, N.138, L.140 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.18, A:L.18, A:A.26, A:V.39, A:K.41, A:L.70, A:T.93, A:L.140 Hydrogen bonds: A:T.86, A:I.89, A:H.137

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: L.64, E.65 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.4

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: H.125, S.126 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.201 GOL.4: 3 residues within 4Å: Chain A: K.115, E.274, H.275 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.115, A:H.275 Water bridges: A:E.274

1 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.5: 3 residues within 4Å: Chain A: K.272, H.275, Q.293 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:K.272, A:H.275 Hydrogen bonds: A:Q.293

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 5 residues within 4Å: Chain A: S.103, W.107, R.110, R.218, P.245 Ligand excluded by PLIP

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.7: 3 residues within 4Å: Chain A: R.95, K.99, H.137 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.95, A:K.99, A:H.137 Water bridges: A:N.220, A:N.220, A:N.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Beltrami, A. et al., Crystal structure of the human LIMK1 kinase domain in complex with staurosporine. To be Published

Release Date

2011-07-06

Peptides

LIM domain kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

LIM domain kinase 1

Related Entries With Identical Sequence