SMTL ID : 3sae.1

Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: H.125, Q.439, R.470, D.472, Y.473, A.474 Ligand excluded by PLIP

3 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: D.566, D.570 Ligands: MG.4, FPS.5 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.566, A:D.570, H2O.7, H2O.11, H2O.29 MG.3: 4 residues within 4Å: Chain A: R.710, D.713, T.717, E.721 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.713, A:T.717, A:E.721, H2O.3, H2O.23, H2O.29 MG.4: 4 residues within 4Å: Chain A: D.566, D.570 Ligands: MG.2, FPS.5 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.566, A:D.570, H2O.3, H2O.7, H2O.29

1 x FPS: S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE(Non-covalent)

FPS.5: 13 residues within 4Å: Chain A: F.535, A.559, Q.562, D.566, D.570, I.667, G.668, Q.669, L.672, R.710, D.713 Ligands: MG.2, MG.4 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.535, A:D.566, A:I.667, A:Q.669, A:L.672, A:D.713 Hydrogen bonds: A:R.710, A:R.710

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 6 residues within 4Å: Chain A: E.349, N.388, K.389, A.392, R.475, I.476 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:E.349, A:R.475, A:I.476 Water bridges: A:E.349, A:K.389, A:Y.473, A:A.474, A:Y.481

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McAndrew, R.P. et al., Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production. Structure (2011)

Release Date

2011-12-14

Peptides

Alpha-bisabolene synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-bisabolene synthase

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