- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.46 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 7 residues within 4Å:- Chain A: Q.126, C.128
- Chain B: C.128, W.129, D.130, C.131
- Ligands: ZN.2
Ligand excluded by PLIPCL.8: 8 residues within 4Å:- Chain A: C.131
- Chain B: C.131
- Chain C: C.131
- Ligands: ZN.1, ZN.9, CL.16, ZN.17, CL.24
Ligand excluded by PLIPCL.11: 7 residues within 4Å:- Chain B: Q.126, C.128
- Chain C: C.128, W.129, D.130, C.131
- Ligands: ZN.10
Ligand excluded by PLIPCL.16: 8 residues within 4Å:- Chain A: C.131
- Chain B: C.131
- Chain C: C.131
- Ligands: ZN.1, CL.8, ZN.9, ZN.17, CL.24
Ligand excluded by PLIPCL.19: 7 residues within 4Å:- Chain A: C.128, W.129, D.130, C.131
- Chain C: Q.126, C.128
- Ligands: ZN.18
Ligand excluded by PLIPCL.24: 8 residues within 4Å:- Chain A: C.131
- Chain B: C.131
- Chain C: C.131
- Ligands: ZN.1, CL.8, ZN.9, CL.16, ZN.17
Ligand excluded by PLIP- 6 x MG: MAGNESIUM ION(Non-covalent)
MG.4: 5 residues within 4Å:- Chain A: T.145, P.146, N.147, R.148
- Ligands: GOL.7
No protein-ligand interaction detected (PLIP)MG.5: 1 residues within 4Å:- Chain A: A.96
No protein-ligand interaction detected (PLIP)MG.12: 5 residues within 4Å:- Chain B: T.145, P.146, N.147, R.148
- Ligands: GOL.15
No protein-ligand interaction detected (PLIP)MG.13: 1 residues within 4Å:- Chain B: A.96
No protein-ligand interaction detected (PLIP)MG.20: 5 residues within 4Å:- Chain C: T.145, P.146, N.147, R.148
- Ligands: GOL.23
No protein-ligand interaction detected (PLIP)MG.21: 1 residues within 4Å:- Chain C: A.96
No protein-ligand interaction detected (PLIP)- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 6 residues within 4Å:- Chain A: A.133, A.137, Y.142, K.150, I.153, T.154
6 PLIP interactions:3 interactions with chain C, 3 interactions with chain A- Water bridges: C:N.119, C:N.119, C:N.119
- Hydrogen bonds: A:Y.142, A:K.150, A:T.154
GOL.7: 6 residues within 4Å:- Chain A: D.13, Q.108, T.145, R.148, R.151
- Ligands: MG.4
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.148, A:R.151
GOL.14: 6 residues within 4Å:- Chain B: A.133, A.137, Y.142, K.150, I.153, T.154
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:Y.142, B:K.150, B:T.154
- Water bridges: A:N.119, A:N.119, A:N.119
GOL.15: 6 residues within 4Å:- Chain B: D.13, Q.108, T.145, R.148, R.151
- Ligands: MG.12
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.148, B:R.151
GOL.22: 6 residues within 4Å:- Chain C: A.133, A.137, Y.142, K.150, I.153, T.154
6 PLIP interactions:3 interactions with chain C, 3 interactions with chain B- Hydrogen bonds: C:Y.142, C:K.150, C:T.154
- Water bridges: B:N.119, B:N.119, B:N.119
GOL.23: 6 residues within 4Å:- Chain C: D.13, Q.108, T.145, R.148, R.151
- Ligands: MG.20
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:R.148, C:R.151
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Laganowsky, A. et al., An approach to crystallizing proteins by metal-mediated synthetic symmetrization. Protein Sci. (2011)
- Release Date
- 2011-09-21
- Peptides
- Lysozyme: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.46 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x CL: CHLORIDE ION(Non-functional Binders)
- 6 x MG: MAGNESIUM ION(Non-covalent)
- 6 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Laganowsky, A. et al., An approach to crystallizing proteins by metal-mediated synthetic symmetrization. Protein Sci. (2011)
- Release Date
- 2011-09-21
- Peptides
- Lysozyme: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B