SMTL ID : 3smj.3 (2 other biounits)

Human poly(ADP-ribose) polymerase 14 (Parp14/Artd8) - catalytic domain in complex with a pyrimidine-like inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x FDR: 2-methyl-3,5,6,7-tetrahydro-4H-cyclopenta[4,5]thieno[2,3-d]pyrimidin-4-one(Non-covalent)

FDR.1: 10 residues within 4Å: Chain A: H.74, G.75, Y.106, F.107, A.108, Y.113, S.114, Y.119, L.174 Ligands: GOL.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.108, A:Y.113, A:Y.113, A:L.174 Hydrogen bonds: A:G.75, A:G.75 Water bridges: A:Y.106 pi-Stacking: A:Y.119, A:Y.119 FDR.3: 10 residues within 4Å: Chain B: H.74, G.75, Y.93, G.95, A.98, Y.106, A.108, S.114, Y.119, L.174 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:Y.106, B:A.108, B:Y.119, B:L.174, B:L.174 Hydrogen bonds: B:G.75, B:G.75 pi-Stacking: B:Y.119, B:Y.119

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: H.74, T.76, V.84, F.89, R.91 Ligands: FDR.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.76, A:R.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wahlberg, E. et al., Family-wide chemical profiling and structural analysis of PARP and tankyrase inhibitors. Nat.Biotechnol. (2012)

Release Date

2011-07-20

Peptides

Poly [ADP-ribose] polymerase 14: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Poly [ADP-ribose] polymerase 14

Related Entries With Identical Sequence