SMTL ID : 4f1l.5 (5 other biounits)

Human Artd8 (Parp14, Bal2) - catalytic domain in complex with inhibitor A16(Z)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x 0RY: (2Z)-4-[(3-carbamoylphenyl)amino]-4-oxobut-2-enoic acid(Non-covalent)

0RY.1: 11 residues within 4Å: Chain A: H.74, G.75, N.97, Y.101, Y.106, F.107, A.108, Y.113, S.114, Y.119, L.174 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.106, A:Y.106, A:Y.106, A:Y.106, A:A.108, A:Y.113, A:Y.113, A:Y.119 Hydrogen bonds: A:G.75, A:G.75, A:N.97, A:Y.113, A:Y.119 0RY.3: 10 residues within 4Å: Chain B: F.73, H.74, G.75, V.99, Y.106, F.107, A.108, Y.113, S.114, Y.119 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:V.99, B:Y.106, B:Y.106, B:A.108, B:Y.113, B:Y.113, B:Y.119 Hydrogen bonds: B:G.75, B:G.75 Water bridges: B:Y.93

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.2: 8 residues within 4Å: Chain A: F.9, P.82, N.85, R.86 Chain B: F.9, V.81, P.82, N.85 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.85, A:R.86, A:R.86, B:N.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Andersson, C.D. et al., Discovery of Ligands for ADP-Ribosyltransferases via Docking-Based Virtual Screening. J.Med.Chem. (2012)

Release Date

2012-09-05

Peptides

Poly [ADP-ribose] polymerase 14: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Poly [ADP-ribose] polymerase 14

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