SMTL ID : 3sox.3 (3 other biounits)

Structure of UHRF1 PHD finger in the free form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

homo-dimer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.5, C.8, C.16, C.19 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.8, A:C.16, A:C.19 ZN.2: 4 residues within 4Å: Chain A: C.21, C.24, H.44, C.47 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.21, A:C.24, A:H.44, A:C.47 ZN.3: 4 residues within 4Å: Chain A: C.36, C.39, C.63, C.66 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.36, A:C.63, A:C.66 ZN.4: 5 residues within 4Å: Chain A: H.22, E.65 Chain B: H.22, E.65 Ligands: ZN.8 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Metal complexes: A:H.22, A:E.65, A:E.65, B:H.22, B:E.65 ZN.5: 4 residues within 4Å: Chain B: C.5, C.8, C.16, C.19 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.5, B:C.8, B:C.16, B:C.19 ZN.6: 4 residues within 4Å: Chain B: C.21, C.24, H.44, C.47 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.21, B:C.24, B:H.44, B:C.47 ZN.7: 4 residues within 4Å: Chain B: C.36, C.39, C.63, C.66 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:C.36, B:C.63, B:C.66 ZN.8: 5 residues within 4Å: Chain A: H.22, E.65 Chain B: H.22, E.65 Ligands: ZN.4 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Metal complexes: A:H.22, A:E.65, B:H.22, B:E.65, B:E.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajakumara, E. et al., PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression. Mol.Cell (2011)

Release Date

2011-08-03

Peptides

E3 ubiquitin-protein ligase UHRF1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

E3 ubiquitin-protein ligase UHRF1

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