SMTL ID : 3spk.1

Tipranavir in Complex with a Human Immunodeficiency Virus Type 1 Protease Variant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.24 Å

Oligo State

homo-dimer

Ligands

2 x TPV: N-(3-{(1R)-1-[(6R)-4-HYDROXY-2-OXO-6-PHENETHYL-6-PROPYL-5,6-DIHYDRO-2H-PYRAN-3-YL]PROPYL}PHENYL)-5-(TRIFLUOROMETHYL)-2-PYRIDINESULFONAMIDE(Non-covalent)

TPV.1: 23 residues within 4Å: Chain A: R.8, L.23, N.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, P.81, T.82 Chain B: R.8, L.23, N.25, G.27, A.28, G.48, G.49, I.50, T.82 Ligands: TPV.2 19 PLIP interactions: 14 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:I.50, A:I.50, A:P.81, A:P.81, A:T.82, B:A.28, B:I.50 Hydrogen bonds: A:N.25, A:D.29, A:D.30, A:G.48, A:I.50, B:N.25, B:I.50 Water bridges: A:D.29, A:G.48, B:R.8 TPV.2: 25 residues within 4Å: Chain A: R.8, L.23, N.25, G.27, A.28, V.32, G.49, I.50, P.81, T.82 Chain B: R.8, L.23, N.25, G.27, A.28, D.29, D.30, V.32, I.47, G.48, G.49, I.50, P.81, T.82 Ligands: TPV.1 20 PLIP interactions: 14 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:L.23, B:A.28, B:V.32, B:I.50, B:P.81, B:P.81, B:T.82, A:A.28, A:V.32, A:I.50, A:I.50 Hydrogen bonds: B:N.25, B:D.29, B:D.30, B:D.30, B:G.48, B:I.50, A:N.25, A:I.50 Water bridges: B:G.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., The higher barrier of darunavir and tipranavir resistance for HIV-1 protease. Biochem.Biophys.Res.Commun. (2011)

Release Date

2011-10-12

Peptides

HIV-1 protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 protease

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