SMTL ID : 3tam.1

Crystal structure of HIV-1 reverse transcriptase (K103N mutant) in complex with inhibitor M06

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

hetero-1-1-mer

Ligands

1 x M06: 3-chloro-5-{[4-methyl-2-oxo-1-(2H-pyrazolo[3,4-b]pyridin-3-ylmethyl)-1,2-dihydropyridin-3-yl]oxy}benzonitrile(Non-covalent)

M06.1: 18 residues within 4Å: Chain A: P.98, L.103, K.104, K.105, N.106, V.109, V.111, Y.184, Y.191, V.192, G.193, P.228, F.230, W.232, L.237, H.238, P.239, Y.321 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.103, A:V.109, A:V.109, A:V.111, A:Y.184, A:F.230, A:L.237 Hydrogen bonds: A:K.104, A:N.106 pi-Stacking: A:Y.191, A:W.232, A:W.232

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gomez, R. et al., Design and synthesis of pyridone inhibitors of non-nucleoside reverse transcriptase. Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-10-26

Peptides

Reverse transcriptase/ribonuclease H: A
p51 RT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

p51 RT

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