SMTL ID : 3th1.2 (1 other biounit)

Crystal structure of chlorocatechol 1,2-dioxygenase from Pseudomonas putida

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: W.212, D.214 No protein-ligand interaction detected (PLIP) GOL.5: 4 residues within 4Å: Chain A: D.51 Chain B: Y.30, V.34, D.35 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Y.30, B:D.35

2 x FE: FE (III) ION(Non-covalent)

FE.2: 4 residues within 4Å: Chain A: Y.130, Y.164, H.188, H.190 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:Y.130, A:Y.164, A:H.188 FE.6: 4 residues within 4Å: Chain B: Y.130, Y.164, H.188, H.190 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:Y.130, B:Y.164, B:H.188, B:H.190

1 x DTD: DITHIANE DIOL(Non-covalent)

DTD.3: 6 residues within 4Å: Chain A: D.51, I.73, G.75, P.76, Y.164, R.185 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.164

1 x 3PH: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE(Non-covalent)

3PH.4: 16 residues within 4Å: Chain A: E.29, Y.30, A.32, G.33, Y.36, L.37, L.49, L.50, R.174, L.175, H.178 Chain B: V.5, V.8, I.12, V.13, L.50 17 PLIP interactions: 6 interactions with chain B, 11 interactions with chain A Hydrophobic interactions: B:V.5, B:V.5, B:V.8, B:I.12, B:V.13, B:L.50, A:Y.30, A:A.32, A:Y.36, A:Y.36, A:L.37, A:L.37, A:L.49, A:L.50, A:L.175 Salt bridges: A:R.174, A:H.178

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rustiguel, J.K. et al., Crystal Structure of chlorocatechol 1,2-dioxygenase from Pseudomonas putida. To be Published

Release Date

2012-08-22

Peptides

Chlorocatechol 1,2-dioxygenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Chlorocatechol 1,2-dioxygenase

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