SMTL ID : 3txt.1

Crystal structure of GlpG in complex with inhibitor DFP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-trimer

Ligands

3 x DFP: DIISOPROPYL PHOSPHONATE(Covalent)

DFP.1: 9 residues within 4Å: Chain A: H.59, N.63, G.107, G.108, L.109, S.110, G.111, Y.114, M.158 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.63, A:S.110 Salt bridges: A:H.59 DFP.2: 9 residues within 4Å: Chain B: H.59, N.63, G.107, G.108, L.109, S.110, G.111, Y.114, M.158 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.63, B:S.110 Salt bridges: B:H.59 DFP.3: 9 residues within 4Å: Chain C: H.59, N.63, G.107, G.108, L.109, S.110, G.111, Y.114, M.158 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.63, C:S.110 Salt bridges: C:H.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xue, Y. et al., The crystal structure of rhomboid protease GlpG in complex with a mechanism-based inhibitor. To be Published

Release Date

2011-12-07

Peptides

Rhomboid protease glpG: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Membrane

We predict this structure to be a membrane protein.
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Rhomboid protease glpG

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