SMTL ID : 3u0a.1 (2 other biounits)

Crystal structure of an Acyl-CoA thioesterase II TesB2 from Mycobacterium marinum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.177 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.177 SO4.2: 4 residues within 4Å: Chain A: Q.15, V.18, R.51, R.82 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.15 Water bridges: A:R.82, A:R.82 Salt bridges: A:R.82 SO4.6: 6 residues within 4Å: Chain B: R.84, G.86, G.87, S.88, F.89 Ligands: NA.12 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.87, B:S.88, B:F.89 Salt bridges: B:R.84 SO4.7: 3 residues within 4Å: Chain A: S.88 Chain B: R.275 Ligands: NA.4 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Salt bridges: B:R.275 Hydrogen bonds: A:S.88, A:S.88 SO4.8: 4 residues within 4Å: Chain B: L.13, E.14, Q.15, R.51 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:L.13, B:Q.15 Salt bridges: B:R.51 SO4.9: 4 residues within 4Å: Chain B: Q.15, V.18, Y.21, R.82 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.15, B:Y.21 Water bridges: B:Y.21, B:Y.21 Salt bridges: B:R.82 SO4.10: 6 residues within 4Å: Chain A: K.168, H.254, K.256 Chain B: K.168, H.254, K.256 8 PLIP interactions: 3 interactions with chain B, 5 interactions with chain A Water bridges: B:S.242, A:K.168, A:S.242 Salt bridges: B:K.168, B:H.254, A:K.168, A:H.254, A:K.256 SO4.11: 6 residues within 4Å: Chain A: H.63, M.106, G.107 Chain B: H.63, M.106, G.107 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:H.63, A:G.107 Water bridges: B:S.105, A:R.93

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: G.230, F.231 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.230

3 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: G.87, S.88, F.89 Ligands: SO4.7 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.87, A:S.88, A:F.89 NA.5: 3 residues within 4Å: Chain A: V.50, V.53, P.55 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.53 NA.12: 3 residues within 4Å: Chain A: R.275 Chain B: S.88 Ligands: SO4.6 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.275, A:R.275

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) (2015)

Release Date

2011-10-05

Peptides

Acyl-CoA thioesterase II TesB2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Acyl-CoA thioesterase II TesB2

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