SMTL ID : 3u90.1

apoferritin: complex with SDS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-24-mer

Ligands

24 x SDS: DODECYL SULFATE(Non-covalent)

SDS.1: 16 residues within 4Å: Chain A: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain V: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.232 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain V Hydrophobic interactions: A:A.55, A:L.81, V:L.81 Hydrogen bonds: A:E.63, V:S.27 Salt bridges: A:R.59 SDS.12: 16 residues within 4Å: Chain B: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain W: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.243 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain W Hydrophobic interactions: B:A.55, B:L.81, W:L.81 Hydrogen bonds: B:E.63, W:S.27 Salt bridges: B:R.59 SDS.23: 16 residues within 4Å: Chain C: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain X: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.254 5 PLIP interactions: 2 interactions with chain X, 3 interactions with chain C Hydrophobic interactions: X:L.81, C:A.55, C:L.81 Hydrogen bonds: X:S.27 Salt bridges: C:R.59 SDS.34: 16 residues within 4Å: Chain D: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain U: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.221 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain U Hydrophobic interactions: D:A.55, D:L.81, U:L.81 Salt bridges: D:R.59 Hydrogen bonds: U:S.27 SDS.45: 16 residues within 4Å: Chain E: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain Q: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.177 5 PLIP interactions: 3 interactions with chain E, 2 interactions with chain Q Hydrophobic interactions: E:A.55, E:L.81, Q:L.81 Salt bridges: E:R.59 Hydrogen bonds: Q:S.27 SDS.56: 16 residues within 4Å: Chain F: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain T: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.210 6 PLIP interactions: 4 interactions with chain F, 2 interactions with chain T Hydrophobic interactions: F:A.55, F:L.81, T:L.81 Hydrogen bonds: F:E.63, T:S.27 Salt bridges: F:R.59 SDS.67: 16 residues within 4Å: Chain G: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain S: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.199 5 PLIP interactions: 2 interactions with chain S, 3 interactions with chain G Hydrophobic interactions: S:L.81, G:A.55, G:L.81 Hydrogen bonds: S:S.27 Salt bridges: G:R.59 SDS.78: 16 residues within 4Å: Chain H: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain R: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.188 6 PLIP interactions: 4 interactions with chain H, 2 interactions with chain R Hydrophobic interactions: H:A.55, H:L.81, R:L.81 Hydrogen bonds: H:E.63, R:S.27 Salt bridges: H:R.59 SDS.89: 16 residues within 4Å: Chain I: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain P: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.166 6 PLIP interactions: 4 interactions with chain I, 2 interactions with chain P Hydrophobic interactions: I:A.55, I:L.81, P:L.81 Hydrogen bonds: I:E.63, P:S.27 Salt bridges: I:R.59 SDS.100: 16 residues within 4Å: Chain J: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain M: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.133 5 PLIP interactions: 3 interactions with chain J, 2 interactions with chain M Hydrophobic interactions: J:A.55, J:L.81, M:L.81 Salt bridges: J:R.59 Hydrogen bonds: M:S.27 SDS.111: 16 residues within 4Å: Chain K: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain N: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.144 5 PLIP interactions: 2 interactions with chain N, 3 interactions with chain K Hydrophobic interactions: N:L.81, K:A.55, K:L.81 Hydrogen bonds: N:S.27 Salt bridges: K:R.59 SDS.122: 16 residues within 4Å: Chain L: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Chain O: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.155 6 PLIP interactions: 2 interactions with chain O, 4 interactions with chain L Hydrophobic interactions: O:L.81, L:A.55, L:L.81 Hydrogen bonds: O:S.27, L:E.63 Salt bridges: L:R.59 SDS.133: 16 residues within 4Å: Chain J: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain M: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.100 5 PLIP interactions: 3 interactions with chain M, 2 interactions with chain J Hydrophobic interactions: M:A.55, M:L.81, J:L.81 Salt bridges: M:R.59 Hydrogen bonds: J:S.27 SDS.144: 16 residues within 4Å: Chain K: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain N: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.111 5 PLIP interactions: 3 interactions with chain N, 2 interactions with chain K Hydrophobic interactions: N:A.55, N:L.81, K:L.81 Salt bridges: N:R.59 Hydrogen bonds: K:S.27 SDS.155: 16 residues within 4Å: Chain L: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain O: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.122 6 PLIP interactions: 4 interactions with chain O, 2 interactions with chain L Hydrophobic interactions: O:A.55, O:L.81, L:L.81 Hydrogen bonds: O:E.63, L:S.27 Salt bridges: O:R.59 SDS.166: 16 residues within 4Å: Chain I: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain P: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.89 6 PLIP interactions: 4 interactions with chain P, 2 interactions with chain I Hydrophobic interactions: P:A.55, P:L.81, I:L.81 Hydrogen bonds: P:E.63, I:S.27 Salt bridges: P:R.59 SDS.177: 16 residues within 4Å: Chain E: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain Q: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.45 6 PLIP interactions: 4 interactions with chain Q, 2 interactions with chain E Hydrophobic interactions: Q:A.55, Q:L.81, E:L.81 Hydrogen bonds: Q:E.63, E:S.27 Salt bridges: Q:R.59 SDS.188: 16 residues within 4Å: Chain H: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain R: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.78 5 PLIP interactions: 2 interactions with chain H, 3 interactions with chain R Hydrophobic interactions: H:L.81, R:A.55, R:L.81 Hydrogen bonds: H:S.27 Salt bridges: R:R.59 SDS.199: 16 residues within 4Å: Chain G: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain S: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.67 6 PLIP interactions: 4 interactions with chain S, 2 interactions with chain G Hydrophobic interactions: S:A.55, S:L.81, G:L.81 Hydrogen bonds: S:E.63, G:S.27 Salt bridges: S:R.59 SDS.210: 16 residues within 4Å: Chain F: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain T: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.56 5 PLIP interactions: 3 interactions with chain T, 2 interactions with chain F Hydrophobic interactions: T:A.55, T:L.81, F:L.81 Salt bridges: T:R.59 Hydrogen bonds: F:S.27 SDS.221: 16 residues within 4Å: Chain D: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain U: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.34 5 PLIP interactions: 3 interactions with chain U, 2 interactions with chain D Hydrophobic interactions: U:A.55, U:L.81, D:L.81 Salt bridges: U:R.59 Hydrogen bonds: D:S.27 SDS.232: 16 residues within 4Å: Chain A: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain V: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.1 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain V Hydrophobic interactions: A:L.81, V:A.55, V:L.81 Hydrogen bonds: A:S.27, V:E.63 Salt bridges: V:R.59 SDS.243: 16 residues within 4Å: Chain B: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain W: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.12 6 PLIP interactions: 4 interactions with chain W, 2 interactions with chain B Hydrophobic interactions: W:A.55, W:L.81, B:L.81 Hydrogen bonds: W:E.63, B:S.27 Salt bridges: W:R.59 SDS.254: 16 residues within 4Å: Chain C: S.27, Y.28, L.31, A.55, E.56, R.59, E.63, L.81 Chain X: S.27, Y.28, A.55, E.56, R.59, E.63, L.81 Ligands: SDS.23 5 PLIP interactions: 3 interactions with chain X, 2 interactions with chain C Hydrophobic interactions: X:A.55, X:L.81, C:L.81 Salt bridges: X:R.59 Hydrogen bonds: C:S.27

240 x CD: CADMIUM ION(Non-covalent)

CD.2: 1 residues within 4Å: Chain A: D.80 Ligand excluded by PLIP CD.3: 7 residues within 4Å: Chain A: C.126 Chain E: C.126, E.130 Ligands: CD.9, CD.47, CD.53, CD.91 Ligand excluded by PLIP CD.4: 2 residues within 4Å: Chain A: E.57, E.60 Ligand excluded by PLIP CD.5: 2 residues within 4Å: Chain A: T.10, E.11 Ligand excluded by PLIP CD.6: 2 residues within 4Å: Chain A: E.53, E.56 Ligand excluded by PLIP CD.7: 1 residues within 4Å: Chain A: E.88 Ligand excluded by PLIP CD.8: 2 residues within 4Å: Chain A: D.38, C.48 Ligand excluded by PLIP CD.9: 4 residues within 4Å: Chain A: H.114, C.126 Ligands: CD.3, CD.91 Ligand excluded by PLIP CD.10: 2 residues within 4Å: Chain A: H.132 Chain E: D.135 Ligand excluded by PLIP CD.11: 1 residues within 4Å: Chain A: H.49 Ligand excluded by PLIP CD.13: 1 residues within 4Å: Chain B: D.80 Ligand excluded by PLIP CD.14: 7 residues within 4Å: Chain B: C.126 Chain G: C.126, E.130 Ligands: CD.20, CD.69, CD.75, CD.124 Ligand excluded by PLIP CD.15: 2 residues within 4Å: Chain B: E.57, E.60 Ligand excluded by PLIP CD.16: 2 residues within 4Å: Chain B: T.10, E.11 Ligand excluded by PLIP CD.17: 2 residues within 4Å: Chain B: E.53, E.56 Ligand excluded by PLIP CD.18: 1 residues within 4Å: Chain B: E.88 Ligand excluded by PLIP CD.19: 2 residues within 4Å: Chain B: D.38, C.48 Ligand excluded by PLIP CD.20: 4 residues within 4Å: Chain B: H.114, C.126 Ligands: CD.14, CD.124 Ligand excluded by PLIP CD.21: 2 residues within 4Å: Chain B: H.132 Chain G: D.135 Ligand excluded by PLIP CD.22: 1 residues within 4Å: Chain B: H.49 Ligand excluded by PLIP CD.24: 1 residues within 4Å: Chain C: D.80 Ligand excluded by PLIP CD.25: 7 residues within 4Å: Chain C: C.126 Chain H: C.126, E.130 Ligands: CD.31, CD.80, CD.86, CD.102 Ligand excluded by PLIP CD.26: 2 residues within 4Å: Chain C: E.57, E.60 Ligand excluded by PLIP CD.27: 2 residues within 4Å: Chain C: T.10, E.11 Ligand excluded by PLIP CD.28: 2 residues within 4Å: Chain C: E.53, E.56 Ligand excluded by PLIP CD.29: 1 residues within 4Å: Chain C: E.88 Ligand excluded by PLIP CD.30: 2 residues within 4Å: Chain C: D.38, C.48 Ligand excluded by PLIP CD.31: 4 residues within 4Å: Chain C: H.114, C.126 Ligands: CD.25, CD.102 Ligand excluded by PLIP CD.32: 2 residues within 4Å: Chain C: H.132 Chain H: D.135 Ligand excluded by PLIP CD.33: 1 residues within 4Å: Chain C: H.49 Ligand excluded by PLIP CD.35: 1 residues within 4Å: Chain D: D.80 Ligand excluded by PLIP CD.36: 7 residues within 4Å: Chain D: C.126 Chain F: C.126, E.130 Ligands: CD.42, CD.58, CD.64, CD.113 Ligand excluded by PLIP CD.37: 2 residues within 4Å: Chain D: E.57, E.60 Ligand excluded by PLIP CD.38: 2 residues within 4Å: Chain D: T.10, E.11 Ligand excluded by PLIP CD.39: 2 residues within 4Å: Chain D: E.53, E.56 Ligand excluded by PLIP CD.40: 1 residues within 4Å: Chain D: E.88 Ligand excluded by PLIP CD.41: 2 residues within 4Å: Chain D: D.38, C.48 Ligand excluded by PLIP CD.42: 4 residues within 4Å: Chain D: H.114, C.126 Ligands: CD.36, CD.113 Ligand excluded by PLIP CD.43: 2 residues within 4Å: Chain D: H.132 Chain F: D.135 Ligand excluded by PLIP CD.44: 1 residues within 4Å: Chain D: H.49 Ligand excluded by PLIP CD.46: 1 residues within 4Å: Chain E: D.80 Ligand excluded by PLIP CD.47: 7 residues within 4Å: Chain E: C.126 Chain I: C.126, E.130 Ligands: CD.3, CD.53, CD.91, CD.97 Ligand excluded by PLIP CD.48: 2 residues within 4Å: Chain E: E.57, E.60 Ligand excluded by PLIP CD.49: 2 residues within 4Å: Chain E: T.10, E.11 Ligand excluded by PLIP CD.50: 2 residues within 4Å: Chain E: E.53, E.56 Ligand excluded by PLIP CD.51: 1 residues within 4Å: Chain E: E.88 Ligand excluded by PLIP CD.52: 2 residues within 4Å: Chain E: D.38, C.48 Ligand excluded by PLIP CD.53: 4 residues within 4Å: Chain E: H.114, C.126 Ligands: CD.3, CD.47 Ligand excluded by PLIP CD.54: 2 residues within 4Å: Chain E: H.132 Chain I: D.135 Ligand excluded by PLIP CD.55: 1 residues within 4Å: Chain E: H.49 Ligand excluded by PLIP CD.57: 1 residues within 4Å: Chain F: D.80 Ligand excluded by PLIP CD.58: 7 residues within 4Å: Chain F: C.126 Chain K: C.126, E.130 Ligands: CD.36, CD.64, CD.113, CD.119 Ligand excluded by PLIP CD.59: 2 residues within 4Å: Chain F: E.57, E.60 Ligand excluded by PLIP CD.60: 2 residues within 4Å: Chain F: T.10, E.11 Ligand excluded by PLIP CD.61: 2 residues within 4Å: Chain F: E.53, E.56 Ligand excluded by PLIP CD.62: 1 residues within 4Å: Chain F: E.88 Ligand excluded by PLIP CD.63: 2 residues within 4Å: Chain F: D.38, C.48 Ligand excluded by PLIP CD.64: 4 residues within 4Å: Chain F: H.114, C.126 Ligands: CD.36, CD.58 Ligand excluded by PLIP CD.65: 2 residues within 4Å: Chain F: H.132 Chain K: D.135 Ligand excluded by PLIP CD.66: 1 residues within 4Å: Chain F: H.49 Ligand excluded by PLIP CD.68: 1 residues within 4Å: Chain G: D.80 Ligand excluded by PLIP CD.69: 7 residues within 4Å: Chain G: C.126 Chain L: C.126, E.130 Ligands: CD.14, CD.75, CD.124, CD.130 Ligand excluded by PLIP CD.70: 2 residues within 4Å: Chain G: E.57, E.60 Ligand excluded by PLIP CD.71: 2 residues within 4Å: Chain G: T.10, E.11 Ligand excluded by PLIP CD.72: 2 residues within 4Å: Chain G: E.53, E.56 Ligand excluded by PLIP CD.73: 1 residues within 4Å: Chain G: E.88 Ligand excluded by PLIP CD.74: 2 residues within 4Å: Chain G: D.38, C.48 Ligand excluded by PLIP CD.75: 4 residues within 4Å: Chain G: H.114, C.126 Ligands: CD.14, CD.69 Ligand excluded by PLIP CD.76: 2 residues within 4Å: Chain G: H.132 Chain L: D.135 Ligand excluded by PLIP CD.77: 1 residues within 4Å: Chain G: H.49 Ligand excluded by PLIP CD.79: 1 residues within 4Å: Chain H: D.80 Ligand excluded by PLIP CD.80: 7 residues within 4Å: Chain H: C.126 Chain J: C.126, E.130 Ligands: CD.25, CD.86, CD.102, CD.108 Ligand excluded by PLIP CD.81: 2 residues within 4Å: Chain H: E.57, E.60 Ligand excluded by PLIP CD.82: 2 residues within 4Å: Chain H: T.10, E.11 Ligand excluded by PLIP CD.83: 2 residues within 4Å: Chain H: E.53, E.56 Ligand excluded by PLIP CD.84: 1 residues within 4Å: Chain H: E.88 Ligand excluded by PLIP CD.85: 2 residues within 4Å: Chain H: D.38, C.48 Ligand excluded by PLIP CD.86: 4 residues within 4Å: Chain H: H.114, C.126 Ligands: CD.25, CD.80 Ligand excluded by PLIP CD.87: 2 residues within 4Å: Chain H: H.132 Chain J: D.135 Ligand excluded by PLIP CD.88: 1 residues within 4Å: Chain H: H.49 Ligand excluded by PLIP CD.90: 1 residues within 4Å: Chain I: D.80 Ligand excluded by PLIP CD.91: 7 residues within 4Å: Chain A: C.126, E.130 Chain I: C.126 Ligands: CD.3, CD.9, CD.47, CD.97 Ligand excluded by PLIP CD.92: 2 residues within 4Å: Chain I: E.57, E.60 Ligand excluded by PLIP CD.93: 2 residues within 4Å: Chain I: T.10, E.11 Ligand excluded by PLIP CD.94: 2 residues within 4Å: Chain I: E.53, E.56 Ligand excluded by PLIP CD.95: 1 residues within 4Å: Chain I: E.88 Ligand excluded by PLIP CD.96: 2 residues within 4Å: Chain I: D.38, C.48 Ligand excluded by PLIP CD.97: 4 residues within 4Å: Chain I: H.114, C.126 Ligands: CD.47, CD.91 Ligand excluded by PLIP CD.98: 2 residues within 4Å: Chain A: D.135 Chain I: H.132 Ligand excluded by PLIP CD.99: 1 residues within 4Å: Chain I: H.49 Ligand excluded by PLIP CD.101: 1 residues within 4Å: Chain J: D.80 Ligand excluded by PLIP CD.102: 7 residues within 4Å: Chain C: C.126, E.130 Chain J: C.126 Ligands: CD.25, CD.31, CD.80, CD.108 Ligand excluded by PLIP CD.103: 2 residues within 4Å: Chain J: E.57, E.60 Ligand excluded by PLIP CD.104: 2 residues within 4Å: Chain J: T.10, E.11 Ligand excluded by PLIP CD.105: 2 residues within 4Å: Chain J: E.53, E.56 Ligand excluded by PLIP CD.106: 1 residues within 4Å: Chain J: E.88 Ligand excluded by PLIP CD.107: 2 residues within 4Å: Chain J: D.38, C.48 Ligand excluded by PLIP CD.108: 4 residues within 4Å: Chain J: H.114, C.126 Ligands: CD.80, CD.102 Ligand excluded by PLIP CD.109: 2 residues within 4Å: Chain C: D.135 Chain J: H.132 Ligand excluded by PLIP CD.110: 1 residues within 4Å: Chain J: H.49 Ligand excluded by PLIP CD.112: 1 residues within 4Å: Chain K: D.80 Ligand excluded by PLIP CD.113: 7 residues within 4Å: Chain D: C.126, E.130 Chain K: C.126 Ligands: CD.36, CD.42, CD.58, CD.119 Ligand excluded by PLIP CD.114: 2 residues within 4Å: Chain K: E.57, E.60 Ligand excluded by PLIP CD.115: 2 residues within 4Å: Chain K: T.10, E.11 Ligand excluded by PLIP CD.116: 2 residues within 4Å: Chain K: E.53, E.56 Ligand excluded by PLIP CD.117: 1 residues within 4Å: Chain K: E.88 Ligand excluded by PLIP CD.118: 2 residues within 4Å: Chain K: D.38, C.48 Ligand excluded by PLIP CD.119: 4 residues within 4Å: Chain K: H.114, C.126 Ligands: CD.58, CD.113 Ligand excluded by PLIP CD.120: 2 residues within 4Å: Chain D: D.135 Chain K: H.132 Ligand excluded by PLIP CD.121: 1 residues within 4Å: Chain K: H.49 Ligand excluded by PLIP CD.123: 1 residues within 4Å: Chain L: D.80 Ligand excluded by PLIP CD.124: 7 residues within 4Å: Chain B: C.126, E.130 Chain L: C.126 Ligands: CD.14, CD.20, CD.69, CD.130 Ligand excluded by PLIP CD.125: 2 residues within 4Å: Chain L: E.57, E.60 Ligand excluded by PLIP CD.126: 2 residues within 4Å: Chain L: T.10, E.11 Ligand excluded by PLIP CD.127: 2 residues within 4Å: Chain L: E.53, E.56 Ligand excluded by PLIP CD.128: 1 residues within 4Å: Chain L: E.88 Ligand excluded by PLIP CD.129: 2 residues within 4Å: Chain L: D.38, C.48 Ligand excluded by PLIP CD.130: 4 residues within 4Å: Chain L: H.114, C.126 Ligands: CD.69, CD.124 Ligand excluded by PLIP CD.131: 2 residues within 4Å: Chain B: D.135 Chain L: H.132 Ligand excluded by PLIP CD.132: 1 residues within 4Å: Chain L: H.49 Ligand excluded by PLIP CD.134: 1 residues within 4Å: Chain M: D.80 Ligand excluded by PLIP CD.135: 7 residues within 4Å: Chain M: C.126 Chain Q: C.126, E.130 Ligands: CD.141, CD.179, CD.185, CD.223 Ligand excluded by PLIP CD.136: 2 residues within 4Å: Chain M: E.57, E.60 Ligand excluded by PLIP CD.137: 2 residues within 4Å: Chain M: T.10, E.11 Ligand excluded by PLIP CD.138: 2 residues within 4Å: Chain M: E.53, E.56 Ligand excluded by PLIP CD.139: 1 residues within 4Å: Chain M: E.88 Ligand excluded by PLIP CD.140: 2 residues within 4Å: Chain M: D.38, C.48 Ligand excluded by PLIP CD.141: 4 residues within 4Å: Chain M: H.114, C.126 Ligands: CD.135, CD.223 Ligand excluded by PLIP CD.142: 2 residues within 4Å: Chain M: H.132 Chain Q: D.135 Ligand excluded by PLIP CD.143: 1 residues within 4Å: Chain M: H.49 Ligand excluded by PLIP CD.145: 1 residues within 4Å: Chain N: D.80 Ligand excluded by PLIP CD.146: 7 residues within 4Å: Chain N: C.126 Chain S: C.126, E.130 Ligands: CD.152, CD.201, CD.207, CD.256 Ligand excluded by PLIP CD.147: 2 residues within 4Å: Chain N: E.57, E.60 Ligand excluded by PLIP CD.148: 2 residues within 4Å: Chain N: T.10, E.11 Ligand excluded by PLIP CD.149: 2 residues within 4Å: Chain N: E.53, E.56 Ligand excluded by PLIP CD.150: 1 residues within 4Å: Chain N: E.88 Ligand excluded by PLIP CD.151: 2 residues within 4Å: Chain N: D.38, C.48 Ligand excluded by PLIP CD.152: 4 residues within 4Å: Chain N: H.114, C.126 Ligands: CD.146, CD.256 Ligand excluded by PLIP CD.153: 2 residues within 4Å: Chain N: H.132 Chain S: D.135 Ligand excluded by PLIP CD.154: 1 residues within 4Å: Chain N: H.49 Ligand excluded by PLIP CD.156: 1 residues within 4Å: Chain O: D.80 Ligand excluded by PLIP CD.157: 7 residues within 4Å: Chain O: C.126 Chain T: C.126, E.130 Ligands: CD.163, CD.212, CD.218, CD.234 Ligand excluded by PLIP CD.158: 2 residues within 4Å: Chain O: E.57, E.60 Ligand excluded by PLIP CD.159: 2 residues within 4Å: Chain O: T.10, E.11 Ligand excluded by PLIP CD.160: 2 residues within 4Å: Chain O: E.53, E.56 Ligand excluded by PLIP CD.161: 1 residues within 4Å: Chain O: E.88 Ligand excluded by PLIP CD.162: 2 residues within 4Å: Chain O: D.38, C.48 Ligand excluded by PLIP CD.163: 4 residues within 4Å: Chain O: H.114, C.126 Ligands: CD.157, CD.234 Ligand excluded by PLIP CD.164: 2 residues within 4Å: Chain O: H.132 Chain T: D.135 Ligand excluded by PLIP CD.165: 1 residues within 4Å: Chain O: H.49 Ligand excluded by PLIP CD.167: 1 residues within 4Å: Chain P: D.80 Ligand excluded by PLIP CD.168: 7 residues within 4Å: Chain P: C.126 Chain R: C.126, E.130 Ligands: CD.174, CD.190, CD.196, CD.245 Ligand excluded by PLIP CD.169: 2 residues within 4Å: Chain P: E.57, E.60 Ligand excluded by PLIP CD.170: 2 residues within 4Å: Chain P: T.10, E.11 Ligand excluded by PLIP CD.171: 2 residues within 4Å: Chain P: E.53, E.56 Ligand excluded by PLIP CD.172: 1 residues within 4Å: Chain P: E.88 Ligand excluded by PLIP CD.173: 2 residues within 4Å: Chain P: D.38, C.48 Ligand excluded by PLIP CD.174: 4 residues within 4Å: Chain P: H.114, C.126 Ligands: CD.168, CD.245 Ligand excluded by PLIP CD.175: 2 residues within 4Å: Chain P: H.132 Chain R: D.135 Ligand excluded by PLIP CD.176: 1 residues within 4Å: Chain P: H.49 Ligand excluded by PLIP CD.178: 1 residues within 4Å: Chain Q: D.80 Ligand excluded by PLIP CD.179: 7 residues within 4Å: Chain Q: C.126 Chain U: C.126, E.130 Ligands: CD.135, CD.185, CD.223, CD.229 Ligand excluded by PLIP CD.180: 2 residues within 4Å: Chain Q: E.57, E.60 Ligand excluded by PLIP CD.181: 2 residues within 4Å: Chain Q: T.10, E.11 Ligand excluded by PLIP CD.182: 2 residues within 4Å: Chain Q: E.53, E.56 Ligand excluded by PLIP CD.183: 1 residues within 4Å: Chain Q: E.88 Ligand excluded by PLIP CD.184: 2 residues within 4Å: Chain Q: D.38, C.48 Ligand excluded by PLIP CD.185: 4 residues within 4Å: Chain Q: H.114, C.126 Ligands: CD.135, CD.179 Ligand excluded by PLIP CD.186: 2 residues within 4Å: Chain Q: H.132 Chain U: D.135 Ligand excluded by PLIP CD.187: 1 residues within 4Å: Chain Q: H.49 Ligand excluded by PLIP CD.189: 1 residues within 4Å: Chain R: D.80 Ligand excluded by PLIP CD.190: 7 residues within 4Å: Chain R: C.126 Chain W: C.126, E.130 Ligands: CD.168, CD.196, CD.245, CD.251 Ligand excluded by PLIP CD.191: 2 residues within 4Å: Chain R: E.57, E.60 Ligand excluded by PLIP CD.192: 2 residues within 4Å: Chain R: T.10, E.11 Ligand excluded by PLIP CD.193: 2 residues within 4Å: Chain R: E.53, E.56 Ligand excluded by PLIP CD.194: 1 residues within 4Å: Chain R: E.88 Ligand excluded by PLIP CD.195: 2 residues within 4Å: Chain R: D.38, C.48 Ligand excluded by PLIP CD.196: 4 residues within 4Å: Chain R: H.114, C.126 Ligands: CD.168, CD.190 Ligand excluded by PLIP CD.197: 2 residues within 4Å: Chain R: H.132 Chain W: D.135 Ligand excluded by PLIP CD.198: 1 residues within 4Å: Chain R: H.49 Ligand excluded by PLIP CD.200: 1 residues within 4Å: Chain S: D.80 Ligand excluded by PLIP CD.201: 7 residues within 4Å: Chain S: C.126 Chain X: C.126, E.130 Ligands: CD.146, CD.207, CD.256, CD.262 Ligand excluded by PLIP CD.202: 2 residues within 4Å: Chain S: E.57, E.60 Ligand excluded by PLIP CD.203: 2 residues within 4Å: Chain S: T.10, E.11 Ligand excluded by PLIP CD.204: 2 residues within 4Å: Chain S: E.53, E.56 Ligand excluded by PLIP CD.205: 1 residues within 4Å: Chain S: E.88 Ligand excluded by PLIP CD.206: 2 residues within 4Å: Chain S: D.38, C.48 Ligand excluded by PLIP CD.207: 4 residues within 4Å: Chain S: H.114, C.126 Ligands: CD.146, CD.201 Ligand excluded by PLIP CD.208: 2 residues within 4Å: Chain S: H.132 Chain X: D.135 Ligand excluded by PLIP CD.209: 1 residues within 4Å: Chain S: H.49 Ligand excluded by PLIP CD.211: 1 residues within 4Å: Chain T: D.80 Ligand excluded by PLIP CD.212: 7 residues within 4Å: Chain T: C.126 Chain V: C.126, E.130 Ligands: CD.157, CD.218, CD.234, CD.240 Ligand excluded by PLIP CD.213: 2 residues within 4Å: Chain T: E.57, E.60 Ligand excluded by PLIP CD.214: 2 residues within 4Å: Chain T: T.10, E.11 Ligand excluded by PLIP CD.215: 2 residues within 4Å: Chain T: E.53, E.56 Ligand excluded by PLIP CD.216: 1 residues within 4Å: Chain T: E.88 Ligand excluded by PLIP CD.217: 2 residues within 4Å: Chain T: D.38, C.48 Ligand excluded by PLIP CD.218: 4 residues within 4Å: Chain T: H.114, C.126 Ligands: CD.157, CD.212 Ligand excluded by PLIP CD.219: 2 residues within 4Å: Chain T: H.132 Chain V: D.135 Ligand excluded by PLIP CD.220: 1 residues within 4Å: Chain T: H.49 Ligand excluded by PLIP CD.222: 1 residues within 4Å: Chain U: D.80 Ligand excluded by PLIP CD.223: 7 residues within 4Å: Chain M: C.126, E.130 Chain U: C.126 Ligands: CD.135, CD.141, CD.179, CD.229 Ligand excluded by PLIP CD.224: 2 residues within 4Å: Chain U: E.57, E.60 Ligand excluded by PLIP CD.225: 2 residues within 4Å: Chain U: T.10, E.11 Ligand excluded by PLIP CD.226: 2 residues within 4Å: Chain U: E.53, E.56 Ligand excluded by PLIP CD.227: 1 residues within 4Å: Chain U: E.88 Ligand excluded by PLIP CD.228: 2 residues within 4Å: Chain U: D.38, C.48 Ligand excluded by PLIP CD.229: 4 residues within 4Å: Chain U: H.114, C.126 Ligands: CD.179, CD.223 Ligand excluded by PLIP CD.230: 2 residues within 4Å: Chain M: D.135 Chain U: H.132 Ligand excluded by PLIP CD.231: 1 residues within 4Å: Chain U: H.49 Ligand excluded by PLIP CD.233: 1 residues within 4Å: Chain V: D.80 Ligand excluded by PLIP CD.234: 7 residues within 4Å: Chain O: C.126, E.130 Chain V: C.126 Ligands: CD.157, CD.163, CD.212, CD.240 Ligand excluded by PLIP CD.235: 2 residues within 4Å: Chain V: E.57, E.60 Ligand excluded by PLIP CD.236: 2 residues within 4Å: Chain V: T.10, E.11 Ligand excluded by PLIP CD.237: 2 residues within 4Å: Chain V: E.53, E.56 Ligand excluded by PLIP CD.238: 1 residues within 4Å: Chain V: E.88 Ligand excluded by PLIP CD.239: 2 residues within 4Å: Chain V: D.38, C.48 Ligand excluded by PLIP CD.240: 4 residues within 4Å: Chain V: H.114, C.126 Ligands: CD.212, CD.234 Ligand excluded by PLIP CD.241: 2 residues within 4Å: Chain O: D.135 Chain V: H.132 Ligand excluded by PLIP CD.242: 1 residues within 4Å: Chain V: H.49 Ligand excluded by PLIP CD.244: 1 residues within 4Å: Chain W: D.80 Ligand excluded by PLIP CD.245: 7 residues within 4Å: Chain P: C.126, E.130 Chain W: C.126 Ligands: CD.168, CD.174, CD.190, CD.251 Ligand excluded by PLIP CD.246: 2 residues within 4Å: Chain W: E.57, E.60 Ligand excluded by PLIP CD.247: 2 residues within 4Å: Chain W: T.10, E.11 Ligand excluded by PLIP CD.248: 2 residues within 4Å: Chain W: E.53, E.56 Ligand excluded by PLIP CD.249: 1 residues within 4Å: Chain W: E.88 Ligand excluded by PLIP CD.250: 2 residues within 4Å: Chain W: D.38, C.48 Ligand excluded by PLIP CD.251: 4 residues within 4Å: Chain W: H.114, C.126 Ligands: CD.190, CD.245 Ligand excluded by PLIP CD.252: 2 residues within 4Å: Chain P: D.135 Chain W: H.132 Ligand excluded by PLIP CD.253: 1 residues within 4Å: Chain W: H.49 Ligand excluded by PLIP CD.255: 1 residues within 4Å: Chain X: D.80 Ligand excluded by PLIP CD.256: 7 residues within 4Å: Chain N: C.126, E.130 Chain X: C.126 Ligands: CD.146, CD.152, CD.201, CD.262 Ligand excluded by PLIP CD.257: 2 residues within 4Å: Chain X: E.57, E.60 Ligand excluded by PLIP CD.258: 2 residues within 4Å: Chain X: T.10, E.11 Ligand excluded by PLIP CD.259: 2 residues within 4Å: Chain X: E.53, E.56 Ligand excluded by PLIP CD.260: 1 residues within 4Å: Chain X: E.88 Ligand excluded by PLIP CD.261: 2 residues within 4Å: Chain X: D.38, C.48 Ligand excluded by PLIP CD.262: 4 residues within 4Å: Chain X: H.114, C.126 Ligands: CD.201, CD.256 Ligand excluded by PLIP CD.263: 2 residues within 4Å: Chain N: D.135 Chain X: H.132 Ligand excluded by PLIP CD.264: 1 residues within 4Å: Chain X: H.49 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, R. et al., Beyond the detergent effect: a binding site for sodium dodecyl sulfate (SDS) in mammalian apoferritin. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-04-25

Peptides

Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Ferritin light chain

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