SMTL ID : 3udg.1 (1 other biounit)

Structure of Deinococcus radiodurans SSB bound to ssDNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x TMP: THYMIDINE-5'-PHOSPHATE(Non-covalent)

TMP.1: 7 residues within 4Å: Chain A: T.33, Y.53, D.118, A.119, G.120, G.122, R.124 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.119 Salt bridges: A:R.124 pi-Stacking: A:Y.53 TMP.2: 7 residues within 4Å: Chain D: T.33, Y.53, D.118, A.119, G.120, G.122, R.124 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:A.119 Salt bridges: D:R.124 pi-Stacking: D:Y.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

George, N.P. et al., Structure and Cellular Dynamics of Deinococcus radiodurans Single-stranded DNA (ssDNA)-binding Protein (SSB)-DNA Complexes. J.Biol.Chem. (2012)

Release Date

2012-05-16

Peptides

Single-stranded DNA-binding protein: AD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

Single-stranded DNA-binding protein

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