SMTL ID : 3uo6.3 (2 other biounits)

Aurora A in complex with YL5-083

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x 0BY: 4-({4-[(2-chlorophenyl)amino]pyrimidin-2-yl}amino)benzoic acid(Non-covalent)

0BY.1: 17 residues within 4Å: Chain A: R.15, L.17, G.18, V.25, A.38, L.72, E.89, Y.90, A.91, P.92, G.94, T.95, E.138, L.141, A.151, V.157, A.159 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.17, A:L.17, A:L.72, A:Y.90, A:T.95, A:L.141, A:V.157 Hydrogen bonds: A:L.17, A:A.91, A:A.91 Salt bridges: A:R.15 0BY.4: 17 residues within 4Å: Chain B: R.15, L.17, G.18, V.25, A.38, L.72, E.89, Y.90, A.91, P.92, G.94, T.95, E.138, L.141, A.151, V.157, A.159 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.17, B:L.72, B:T.95, B:L.141, B:V.157 Hydrogen bonds: B:A.91, B:A.91 Salt bridges: B:R.15

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: Y.26, R.83 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.83 EDO.3: 2 residues within 4Å: Chain A: H.244, N.245 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.245 EDO.5: 4 residues within 4Å: Chain B: L.8, I.13, Y.26, R.83 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.83 EDO.6: 2 residues within 4Å: Chain B: H.244, N.245 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:H.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin, M.P. et al., A Novel Mechanism by Which Small Molecule Inhibitors Induce the DFG Flip in Aurora A. Acs Chem.Biol. (2012)

Release Date

2012-01-25

Peptides

Aurora kinase A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Aurora kinase A

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