SMTL ID : 3uol.3 (2 other biounits)

Aurora A in complex with SO2-162

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x 0C7: N~4~-(2-chlorophenyl)-N~2~-[4-(1H-tetrazol-5-yl)phenyl]pyrimidine-2,4-diamine(Non-covalent)

0C7.1: 16 residues within 4Å: Chain A: R.15, L.17, G.18, V.25, A.38, L.72, E.89, Y.90, A.91, G.94, T.95, E.138, L.141, A.151, V.157, A.159 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.17, A:L.72, A:Y.90, A:T.95, A:L.141 Hydrogen bonds: A:R.15, A:A.91, A:A.91 Water bridges: A:L.17 0C7.7: 16 residues within 4Å: Chain B: R.15, L.17, G.18, V.25, A.38, L.72, E.89, Y.90, A.91, G.94, T.95, E.138, L.141, A.151, V.157, A.159 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.17, B:L.72, B:Y.90, B:T.95, B:L.141 Hydrogen bonds: B:R.15, B:A.91, B:A.91

12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: H.244, N.245 No protein-ligand interaction detected (PLIP) EDO.3: 6 residues within 4Å: Chain A: E.180, S.220, R.221, H.244 Chain B: Y.212, Q.213 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Water bridges: A:S.220, A:R.221, B:Y.212 EDO.4: 4 residues within 4Å: Chain A: L.8, Y.26, R.83, Y.85 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.83, A:Y.85, A:Y.85 EDO.5: 3 residues within 4Å: Chain A: L.103, K.105, F.106 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.103 EDO.6: 2 residues within 4Å: Chain A: D.228, F.229 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.228 EDO.8: 5 residues within 4Å: Chain B: Q.5, R.57, Y.77, F.78, H.79 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.5, B:R.57, B:H.79 EDO.9: 2 residues within 4Å: Chain B: H.244, N.245 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.245 EDO.10: 3 residues within 4Å: Chain B: L.8, Y.26, R.83 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.83 Water bridges: B:Y.26, B:Y.26 EDO.11: 3 residues within 4Å: Chain B: L.103, K.105, F.106 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:L.103 EDO.12: 2 residues within 4Å: Chain B: D.228, F.229 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.228 EDO.13: 5 residues within 4Å: Chain B: H.126, E.186, L.190, M.251, L.252 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:L.252 EDO.14: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin, M.P. et al., A Novel Mechanism by Which Small Molecule Inhibitors Induce the DFG Flip in Aurora A. Acs Chem.Biol. (2012)

Release Date

2012-01-25

Peptides

Aurora kinase A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Aurora kinase A

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