SMTL ID : 3upi.1 (1 other biounit)

Synthesis of novel 4,5-dihydrofurano indoles and their evaluation as HCV NS5B polymerase inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: R.505, V.530, R.531, T.532 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.531, A:T.532, A:T.532 Water bridges: A:R.505, A:R.505, A:R.505, A:R.505, A:R.505 Salt bridges: A:R.505

1 x 0C2: (3S)-6-(2,5-DIFLUOROBENZYL)-3-METHYL-N-(METHYLSULFONYL)-8-(2-OXO-1,2-DIHYDROPYRIDIN-3-YL)-3,6-DIHYDRO-2H-FURO[2,3-E]INDOLE-7-CARBOXAMIDE(Non-covalent)

0C2.2: 17 residues within 4Å: Chain A: F.193, P.197, R.200, N.316, D.319, C.366, S.367, L.384, G.410, N.411, M.414, Y.415, Q.446, I.447, Y.448, G.449, S.556 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:P.197, A:D.319, A:L.384, A:M.414, A:Y.415, A:Y.448 Hydrogen bonds: A:Q.446, A:Y.448, A:S.556 Water bridges: A:Q.446 pi-Stacking: A:Y.448 Halogen bonds: A:S.367

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Velazquez, F. et al., Synthesis of New 4,5-Dihydrofuranoindoles and Their Evaluation as HCV NS5B Polymerase Inhibitors. Org.Lett. (2012)

Release Date

2012-01-25

Peptides

RNA-directed RNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-directed RNA polymerase

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