SMTL ID : 3v7c.1

Cystal structure of SaBPL in complex with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x C77: 5'-deoxy-2',3'-O-(1-methylethylidene)-5'-(4-{5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentyl}-1H-1,2,3-triazol-1-yl)adenosine(Non-covalent)

C77.1: 25 residues within 4Å: Chain A: S.93, T.94, Q.95, Q.116, G.119, R.120, G.121, R.122, R.125, H.126, W.127, S.128, W.136, M.137, S.138, K.187, G.190, F.191, G.208, I.209, G.210, N.212, I.224, R.227, A.228 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:R.122, A:W.127, A:W.127 Hydrogen bonds: A:T.94, A:Q.95, A:Q.116, A:Q.116, A:R.120, A:R.120, A:S.128, A:S.128, A:N.212 Water bridges: A:S.93 pi-Stacking: A:W.127, A:W.127 C77.2: 25 residues within 4Å: Chain B: S.93, T.94, Q.95, Q.116, G.119, R.120, G.121, R.122, R.125, H.126, W.127, S.128, W.136, M.137, S.138, K.187, G.190, F.191, G.208, I.209, G.210, N.212, I.224, R.227, A.228 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:R.122, B:W.127, B:W.127 Hydrogen bonds: B:T.94, B:Q.95, B:Q.116, B:Q.116, B:R.120, B:R.120, B:S.128, B:S.128, B:N.212 Water bridges: B:S.93 pi-Stacking: B:W.127, B:W.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Soares da Costa, T.P. et al., Selective inhibition of biotin protein ligase from Staphylococcus aureus. J.Biol.Chem. (2012)

Release Date

2012-04-18

Peptides

Biotin ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Biotin ligase

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